RLBWT-Based LCP Computation in Compressed Space for Terabase-Scale Pangenome Analysis
Ahsan Sanaullah, Nathaniel K. Brown, Pramesh Shakya, Arun Deegutla, Ardalan Naseri, Ben Langmead, Degui Zhi, Shaojie Zhang
The paper introduces algorithms for constructing RLBWT-based compressed full text indexes in compressed space, reducing memory usage for large-scale pangenome analysis.
Bioinformatics · Jul 1, 2026Peer-reviewedBioinformatics