Author

BAI Ding

Mohamed bin Zayed University of Artificial Intelligence

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Bioinformatics· 1 Physiology· 1

Signature Assays, Organisms & Methods

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Research Focus:differential expression· 2 Research Focus:gene regulatory network inference· 2 Assay:bulk RNA-seq· 1 Research Focus:cell type annotation· 1 Approach:deep learning· 1 Research Focus:drug response / drug discovery· 1 Approach:experimental assay· 1 Organism:human· 1

Frequent Co-Authors

Bohuai ZhouiD· 1 shared Danielle Ann GrotjahniD· 1 shared Digvijay SinghiD· 1 shared Eric Xing· 1 shared Ganran XuiD· 1 shared Hamidreza RahmaniiD· 1 shared Jeremy Parker YangiD· 1 shared Jiahao GaoiD· 1 shared

Activity by Year

2026-2026 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 21 mutual co-author links

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1 shared paperPhysiology

Bohuai ZhouORCID

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2 papers

Recent·Most cited

Wnt/β-catenin signaling restrains developmental beiging and imprints long-term energy expenditure

Ganran Xu, tian Xie Chen, Qiuwen Zhang, Bohuai Zhou, Jingfan Xue, Jingang Xiao, BAI Ding, Yiping Chen, Weidong Tian, Zhi Liu

This study identifies Wnt/β-catenin signaling as a brake on developmental beige adipocyte formation and shows its role in regulating long-term energy expenditure.

bioRxiv · Mar 27, 2026 · PreprintPhysiology

scLong: A Billion-Parameter Foundation Model for Capturing Long-Range Gene Context in Single-Cell Transcriptomics

BAI Ding, Shentong Mo, Ruiyi Zhang, Yingtao Luo, Jiahao Gao, Jeremy Parker Yang, Qiuyang Wu, Digvijay Singh, Hamidreza Rahmani, Tiffany Amariuta, Danielle Ann Grotjahn, Sheng Zhong, Nathan Lewis, Wei Wang, Trey E. Ideker, , Eric Xing

scLong is a billion-parameter foundation model that captures long-range gene context in scRNA-seq by modeling all genes and integrating gene knowledge, outperforming existing models in various tasks.

Nature Communications · Feb 5, 2026Peer-reviewedBioinformatics