Author

Benjamin Perry

Duke UniversityPrimary ORCID profile (0000-0001-6715-4213 · 1 paper)Unclaimed ORCID profile · follow to get notified of new preprints

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Same name, identified by ORCID

Benjamin PerryiD1 paper · Drugs for Neglected Diseases Initiative

Biology Disciplines

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Biochemistry· 1 Microbiology· 1 Neuroscience· 1

Signature Assays, Organisms & Methods

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Approach:experimental assay· 2 Research Focus:cell type annotation· 1 Approach:deep learning· 1 Assay:imaging· 1 Assay:metagenomics· 1 Organism:mouse· 1 Organism:non-human primate· 1 Assay:protein structure· 1

Frequent Co-Authors

Alexander SheriD· 1 shared Andra M. RudziteiD· 1 shared Bruce C. RobertsoniD· 1 shared Depeng WangiD· 1 shared Fiona Robertson· 1 shared Greg D. FieldiD· 1 shared Janelle R. WierengaiD· 1 shared Jemma L. GeogheganiD· 1 shared

Activity by Year

2023-2026 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 16 mutual co-author links

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1 shared paperNeuroscience

Alexander SherORCID

Mutual co-authors in cluster

Author profile →

3 papers

Recent·Most cited

Social behaviour is a key determinant of virome diversity in New Zealand passerines

Kristina M Hames, Stephanie J. Waller, Rebecca K. French, Janelle R. Wierenga, Benjamin Perry, Fiona Robertson, Bruce C. Robertson, Jemma L. Geoghegan

This study identifies 217 viruses in New Zealand passerines, finding that social behavior significantly influences virome diversity.

bioRxiv · Oct 16, 2026 · PreprintMicrobiology

AlphaFast: High-throughput AlphaFold 3 via GPU-accelerated MSA construction

Benjamin Perry, Jeonghyeon Kim, Philip A. Romero

AlphaFast accelerates AlphaFold 3 by using GPU-accelerated MSA construction, achieving significant speedups and cost reductions while maintaining structural accuracy.

bioRxiv · Feb 18, 2026 · PreprintBiochemistry

Large scale interrogation of retinal cell functions by 1-photon light-sheet microscopy

Suva Roy, Depeng Wang, Andra M. Rudzite, Benjamin Perry, Miranda L. Scalabrino, Mishek Thapa, Yiyang Gong, Alexander Sher, Greg D. Field

This paper introduces a 1-photon light-sheet microscopy system for high-throughput, high-resolution functional analysis of retinal neurons.

Cell Reports Methods · Apr 1, 2023Peer-reviewedNeuroscience