Author

Bin Li

Jiangsu Academy of Agricultural Sciences

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Same name, identified by ORCID

Biology Disciplines

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Bioengineering· 1 Bioinformatics· 1 Ecology· 1 Immunology· 1 Microbiology· 1 Plant Biology· 1

Signature Assays, Organisms & Methods

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Approach:statistical model· 4 Approach:experimental assay· 3 Organism:human· 3 Research Focus:drug response / drug discovery· 2 Assay:proteomics· 2 Research Focus:benchmarking· 1 Research Focus:cell signaling & trafficking· 1 Research Focus:cell type annotation· 1

Frequent Co-Authors

Benjamin V. Park· 1 shared Bin He· 1 shared Bruce R. Blazar· 1 shared Chengxiang Zhang· 1 shared Chunxi Zeng· 1 shared Fan Pan· 1 shared Haicang ZhangiD· 1 shared Hongbin Shen· 1 shared

Activity by Year

2016-2025 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 14 mutual co-author links

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1 shared paperImmunology

Benjamin V. Park

Mutual co-authors in cluster

Author profile →

6 papers

Recent·Most cited

PocketX: Preference Alignment for Protein Pockets Design through Group Relative Policy Optimization

Yuliang Fan, Zaikai He, Bin Li, Bin He, Mingshu Zhang, Jian Zhang, Haicang Zhang

PocketX uses reinforcement learning to align protein pocket design with biophysical properties, outperforming existing methods on binding energy and evolutionary plausibility.

bioRxiv · Dec 28, 2025 · PreprintBioinformatics

Signal peptidase complex mediates rotavirus VP7 processing and virion assembly

Xuejiao Zhu, Liliana Sánchez-Tacuba, Wandy L. Beatty, Bin Li, Siyuan Ding

This study identifies the signal peptidase complex (SPC) as essential for rotavirus VP7 processing and virion assembly, showing that SPC cleavage of VP7's signal peptide is critical for infectious particle formation.

bioRxiv · Nov 4, 2025 · PreprintMicrobiology

Branching Networks Can Have Opposing Influences on Genetic Variation in Riverine Metapopulations

Ming-Chih Chiu, Bin Li, Kei Nukazawa, Vincent H. Resh, Thaddeus Carvajal, Kozo Watanabe

This study shows branching river networks can both increase and decrease genetic divergence in metapopulations, depending on species dispersal traits.

bioRxiv · Jul 8, 2020Ecology

TRAF6 directs Foxp3 localization and facilitates Treg function through K63-type ubiquitination

Xuhao Ni, Jinhui Tao, Jian Gu, Benjamin V. Park, Zuojia Chen, Stephanie Newman, Hongbin Shen, Xuehao Wang, Bin Li, Bruce R. Blazar, Joseph Barbi, Fan Pan, Ling Lu

This study shows TRAF6 ubiquitinates Foxp3 at K262, ensuring its proper localization and function in Tregs, which enhances anti-tumor immunity.

bioRxiv · May 7, 2018 · PreprintImmunology

Phosphorothioate-modified DNA oligonucleotides inactivate CRISPR-Cpf1 mediated genome editing

Bin Li, Chunxi Zeng, Wenqing Li, Xinfu Zhang, Xiao Luo, Weiyu Zhao, Chengxiang Zhang, Yizhou Dong

This study shows that phosphorothioate-modified DNA oligonucleotides block CRISPR-Cpf1 mediated gene editing by inhibiting Cpf1-crRNA complex binding to target DNA.

bioRxiv · Feb 6, 2018 · PreprintBioengineering

DIRC3 and close to NABP1 Genetics Polymorphisms correlated with Prognostic Survival in Patients with Laryngeal Squamous Cell Carcinoma

Zhen Shen, Wanli Ren, Yanxia Bai, Zhengshuai Chen, Jingjie Li, Bin Li, Tianbo Jin, Peilong Cao, Shao Yuan

The paper identifies two genetic polymorphisms, rs11903757 and rs966423, associated with poor prognosis in laryngeal squamous cell carcinoma patients.

bioRxiv · Mar 9, 2016 · PreprintPlant Biology