Logan: Planetary-Scale Genome Assembly Surveys Life's Diversity
Rayan Chikhi, Téo Lemane, Raphaël Loll‐Krippleber, Mercè Montoliu-Nerin, Brice Raffestin, Antonio Pedro Camargo, Carson J. Miller, Mateus Bernabe Fiamenghi, Daniel Paiva Agustinho, Sina Majidian, Greg Autric, Maxime Hugues, Junkyoung Lee, Roland Faure, Kristen D. Curry, , Artem Babaian
Assembling the Sequence Read Archive (27.3 million accessions) with over 100-fold compression enables minutes-scale k-mer search and mining of enzymes, plasmids, proteins and viral reactivation.
bioRxiv · Jul 30, 2024 · PreprintBioinformatics✦ In-depth digest