Author

C. Wheeler

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Cancer Biology· 2

Signature Assays, Organisms & Methods

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Research Focus:differential expression· 2 Organism:human· 2 Research Focus:benchmarking· 1 Assay:bulk RNA-seq· 1 Research Focus:cell type annotation· 1 Research Focus:cell-cell communication· 1 Research Focus:clustering· 1 Approach:deep learning· 1

Frequent Co-Authors

B. P. Berman· 1 shared D. P. Carbone· 1 shared D. Spakowicz· 1 shared J. Cayford· 1 shared J.-V. Turatsinze· 1 shared L. Payen-Gay· 1 shared M. Herzog· 1 shared M. Muniak· 1 shared

Activity by Year

2022-2024 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 24 mutual co-author links

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1 shared paperCancer Biology

B. P. Berman

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2 papers

Recent·Most cited

Long-read sequencing identifies aberrant fragmentation patterns linked to elevated cell-free DNA levels in cancer

B. P. Berman, S. A. Erdman, C. Wheeler, J. Cayford, J.-V. Turatsinze, M. Ouzounova, M. Piecyk, M. Herzog, L. Payen-Gay, T. Walter, T. K. Kelly

The paper uses long-read sequencing to analyze cfDNA fragmentation patterns in cancer patients, identifying hypofragmentation and hyperfragmentation linked to elevated cfDNA levels.

bioRxiv · May 2, 2024Cancer Biology

Exogenous sequences in tumors and immune cells (exotic): a tool for estimating the microbe abundances in tumor RNAseq data

R. Hoyd, C. Wheeler, Y. Liu, M. S. J. Singh, M. Muniak, N. Denko, D. P. Carbone, M. Xiaokui, D. Spakowicz

The paper introduces a tool to estimate microbe abundances in tumor RNAseq data and identifies associations between microbes and clinical outcomes.

bioRxiv · Aug 16, 2022Cancer Biology