Pathway-enhanced Transformer-based robust model for quantifying cell types of origin of cell-free transcriptome
Shuo Yan, Xuetao Tian, Yulong Qin, Jiayi Li, Tingyu Yang, Dongyue Yu, Wentao Liu, Jinghua Sun, Chengbin Hu, Qing Zhou, Zhongzhen Liu, Wenjing Wang
Deconformer improves cell type deconvolution of cell-free RNA by integrating biological pathways, showing better performance and interpretability across multiple datasets.
bioRxiv · Feb 28, 2024 · PreprintBioinformatics