Author

D. E. Schaffer

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Microbiology· 1

Signature Assays, Organisms & Methods

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Organism:bacteria (other)· 1 Approach:deep learning· 1 Research Focus:gene regulatory network inference· 1 Assay:metagenomics· 1 Approach:statistical model· 1 Research Focus:variant calling· 1

Frequent Co-Authors

A. Lucas· 1 shared J. Wickramasinghe· 1 shared N. Auslander· 1 shared

Activity by Year

2023-2023 · peak 1/yr

Co-Author Collaboration Network

3 top collaborators · 3 mutual co-author links

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1 shared paperMicrobiology

A. Lucas

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1 paper

Recent·Most cited

kMermaid: Ultrafast functional classification of microbial reads

A. Lucas, D. E. Schaffer, J. Wickramasinghe, N. Auslander

kMermaid provides an ultrafast and accurate method for classifying metagenomic reads into functional protein clusters, improving upon existing methods with lower computational demands.

bioRxiv · Aug 28, 2023 · PreprintMicrobiology