Author

Dat Tran

Baylor College of Medicine

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Neuroscience· 2 Bioinformatics· 1

Signature Assays, Organisms & Methods

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Research Focus:benchmarking· 2 Approach:deep learning· 2 Approach:experimental assay· 2 Organism:mouse· 2 Assay:spatial transcriptomics· 2 Research Focus:cell type annotation· 1 Research Focus:cell-cell communication· 1 Research Focus:database / resource· 1

Frequent Co-Authors

Andersen ChangiD· 2 shared Andreas Savas ToliasiD· 2 shared Casey M Schneider-MizelliD· 2 shared Eric Y. WangiD· 2 shared Fabian H. SinziD· 2 shared Forrest CollmaniD· 2 shared Jacob ReimeriD· 2 shared Jiakun FuiD· 2 shared

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2020-2025 · peak 1/yr

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10 top collaborators · 45 mutual co-author links

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2 shared papersNeuroscience

Andersen ChangORCID

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3 papers

Recent·Most cited

Functional connectomics reveals general wiring rule in mouse visual cortex

Zhuokun Ding, Paul G. Fahey, Stelios Papadopoulos, Eric Y. Wang, Brendan Celii, Christos Papadopoulos, Andersen Chang, Alexander B. Kunin, Dat Tran, Jiakun Fu, Zhiwei Ding, Saumil Surendra Patel, Lydia Ntanavara, Rachel Froebe, Kayla Ponder, , Andreas Savas Tolias

Functionally similar neurons in mouse visual cortex connect preferentially across layers and areas, including feedback, and feature tuning, not receptive-field position, predicts synapses beyond axon-dendrite proximity.

Nature · Apr 9, 2025Peer-reviewedNeuroscience✦ In-depth digest

Foundation model of neural activity predicts response to new stimulus types and anatomy

Eric Y. Wang, Paul G. Fahey, Zhuokun Ding, Stelios Papadopoulos, Kayla Ponder, Marissa A. Weis, Andersen Chang, Taliah Muhammad, Saumil Surendra Patel, Zhiwei Ding, Dat Tran, Jiakun Fu, Casey M Schneider-Mizell, R. Clay Reid, Forrest Collman, , Andreas Savas Tolias

This paper trains a foundation model on neural activity data to predict responses to new stimuli and anatomical features, showing strong generalization across mice and tasks.

bioRxiv · Mar 21, 2023 · PreprintNeuroscience

BBrowser: Making single-cell data easily accessible

Tri Le, Tan Phan, Minh Pham, Dat Tran, Loc Lam, Ngoc Tung Nguyen, Thao Truong, Hy Vuong, Tam Luu, Nam Phung, Ngan Pham, Trang Thi Thu Nguyen, Oanh Minh Pham, An Nguyen, Huy Tan Nguyen, , Son Truong Pham

A downloadable application pairs a curated single-cell database with a big-data analytics layer and a visualisation module for exploring single-cell omics data.

bioRxiv · Dec 11, 2020 · PreprintBioinformatics