Dawei Shen

Weakly Supervised Vector Quantization for Whole Slide Image Classification

This paper introduces VQ-MIL, a weakly supervised vector quantization method for WSI classification, achieving state-of-the-art results on benchmark datasets.

Chlomito: a novel tool for precise elimination of organelle genome contamination in nuclear genome assemblies

Chlomito removes organelle genome contamination from nuclear assemblies with high accuracy and efficiency, improving genome quality.

CircRNA-Pro: A Novel Toolkit for High-Precision Detection of Differentially Expressed Circular RNAs and Translatable Circular RNAs

CircRNA-Pro detects differentially expressed and translatable circRNAs using integrated algorithms and validation against databases, validated on breast cancer and SARS-CoV-2 datasets.

Chrom-pro: A User-Friendly Toolkit for De-novo Chromosome Assembly and Genomic Analysis

Chrom-pro is a toolkit for chromosome-level genome assembly and analysis that integrates SGS, TGS, and Hi-C data into an automated workflow, achieving high BUSCO scores and collinearity with reference genomes.

Involuntary orienting and conflict resolution during auditory attention: The role of ventral and dorsal streams

Afferent-efferent connectivity between auditory brainstem and cortex accounts for poorer speech-in-noise comprehension in older adults

The paper shows that reduced afferent connectivity between auditory brainstem and cortex in older adults predicts poorer speech-in-noise comprehension.