Assessment of Metagenomic MinION and Illumina sequencing as an approach for the recovery of whole genome sequences of chikungunya and dengue viruses directly from clinical samples.
L. E. Kafetzopoulou, K. Efthymiadis, K. Lewandowski, A. Crook, D. Carter, J. Osborne, E. Aarons, R. Hewson, J. A. Hiscox, M. W. Carroll, R. Vipond, S. T. Pullan
This study assesses metagenomic sequencing using MinION and Illumina to recover whole genomes of chikungunya and dengue viruses from clinical samples, showing high feasibility for phylogenetic analysis.
bioRxiv · Jun 25, 2018Microbiology