BamQuery: a proteogenomic tool for the genome-wide exploration of the immunopeptidome
M. V. Ruiz Cuevas, M.-P. Hardy, J.-D. Larouche, A. Apavaloaei, E. Kina, K. Vincent, P. Gendron, J.-P. Laverdure, C. Durette, P. Thibault, S. Lemieux, C. Perreault, G. Ehx
BamQuery quantifies MAPs from various genomic regions in bulk and single-cell RNA-seq data, revealing non-canonical sources of tumor antigens and viral peptides.
bioRxiv · Oct 7, 2022Immunology