Author

Edoardo M Airoldi

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Bioinformatics· 1 Genomics· 1

Signature Assays, Organisms & Methods

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Assay:bulk RNA-seq· 2 Research Focus:differential expression· 2 Research Focus:cell type annotation· 1 Research Focus:clustering· 1 Approach:deep learning· 1 Approach:experimental assay· 1 Organism:human· 1 Organism:mouse· 1

Frequent Co-Authors

Christopher B Burge· 2 shared Yarden Katz· 2 shared Albert W Cheng· 1 shared Bang Wong· 1 shared Christopher J Lengner· 1 shared Eric T Wang· 1 shared Ethan M Sokol· 1 shared Feifei Li· 1 shared

Activity by Year

2014-2014 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 29 mutual co-author links

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2 shared papersGenomics

Christopher B Burge

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2 papers

Recent·Most cited

Musashi proteins are post-transcriptional regulators of the epithelial-luminal cell state

Yarden Katz, Feifei Li, Nicole Lambert, Ethan M Sokol, Wai-Leong Tam, Albert W Cheng, Edoardo M Airoldi, Christopher J Lengner, Piyush B Gupta, Zhengquan Yu, Rudolf Jaenisch, Christopher B Burge

This study identifies Musashi proteins as regulators of the epithelial-luminal cell state by repressing EMT and promoting epithelial gene expression in neural and breast cells.

bioRxiv · Jun 12, 2014Genomics

Sashimi plots: Quantitative visualization of alternative isoform expression from RNA-seq data

Yarden Katz, Eric T Wang, Jacob Stilterra, Schraga Schwartz, Bang Wong, Helga Thorvaldsdóttir, James T Robinson, Jill P Mesirov, Edoardo M Airoldi, Christopher B Burge

The paper introduces Sashimi plots as a method to visualize and compare isoform expression across multiple RNA-Seq samples.

bioRxiv · Feb 11, 2014Bioinformatics