Author

Emma Betteridge

Wellcome Sanger Institute

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Genomics· 3 Bioinformatics· 1 Evolutionary Biology· 1

Signature Assays, Organisms & Methods

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Approach:experimental assay· 5 Assay:long-read sequencing· 3 Assay:whole-genome sequencing· 3 Research Focus:database / resource· 2 Organism:human· 2 Organism:bacteria (other)· 1 Assay:bulk RNA-seq· 1 Research Focus:cell type annotation· 1

Frequent Co-Authors

Craig H. CortoniD· 4 shared Jason Skelton· 4 shared Jale DolucaniD· 3 shared James TorranceiD· 3 shared Karen Oliver· 3 shared Kerstin HoweiD· 3 shared Michelle SmithiD· 3 shared Shane McCarthyiD· 3 shared

Activity by Year

2020-2024 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 45 mutual co-author links

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4 shared papersGenomics

Craig H. CortonORCID

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Author profile →

5 papers

Recent·Most cited

The sensory shark: high-quality morphological, genomic and transcriptomic data for the small spotted catshark Scyliorhinus canicula reveal the molecular bases of sensory organ evolution in jawed vertebrates

Hélène Mayeur, Jake Leyhr, John F. Mulley, Nicolas Leurs, Léo Michel, Kanika Sharma, Ronan Lagadec, Jean‐Marc Aury, Owen G. Osborne, Peter O. Mulhair, Julie Poulain, Sophie Mangenot, Daniel Mead, Michelle Smith, Craig H. Corton, , Mélanie Debiais‐Thibaud

This study integrates genomic, transcriptomic, and morphological data from the small-spotted catshark to uncover molecular mechanisms underlying sensory organ evolution in jawed vertebrates.

Molecular Biology and Evolution · Dec 1, 2024Peer-reviewedEvolutionary Biology

Using de novo assembly to identify structural variation of complex immune system gene regions

Jiayuan Zhang, Hannah Roberts, David Flores Santa Cruz, Antony J. Cutler, Andrew Brown, Justin P. Whalley, Olga Mielczarek, David Buck, Helen E. Lockstone, Barbara Xella, Karen L. Oliver, Craig H. Corton, Emma Betteridge, Rachael J. M. Bashford-Rogers, Julian Charles Knight, , Gavin Band

The paper uses long-read sequencing and de novo assembly to identify structural variation in immune system gene regions from a single individual, revealing challenges in current variant calling methods.

PLoS Computational Biology · Aug 3, 2021Peer-reviewedBioinformatics

Complete vertebrate mitogenomes reveal widespread gene duplications and repeats

Giulio Formenti, Arang Rhie, Jennifer Balacco, Bettina Haase, Jacquelyn Mountcastle, Olivier D. Fedrigo, Samara Brown, Marco Rosario Capodiferro, Farooq O. Al-Ajli, Roberto Ambrosini, Peter Houde, Sergey Koren, Karen Oliver, Michelle Smith, Jason Skelton, , Erich David Jarvis

The paper develops a pipeline for mitochondrial genome assembly and identifies errors and novel duplications in reference mitogenomes.

Genome biology · Apr 28, 2021Peer-reviewedGenomics

Template switching mechanism drives the tandem amplification of chromosome 20q11.21 in human pluripotent stem cells

Jason Alexander Halliwell, Duncan Baker, Kim Judge, Michael Andrew Quail, Karen L. Oliver, Emma Betteridge, Jason Skelton, Peter W. Andrews, Ivana Barbaric

bioRxiv · Jul 11, 2020 · PreprintGenomics

The Gene-Rich Genome of the Scallop Pecten maximus

Nathan J. Kenny, Shane McCarthy, Olga Dudchenko, Katherine James, Emma Betteridge, Craig H. Corton, Jale Dolucan, Daniel G. Mead, Karen Oliver, Arina D. Omer, Sarah E. Pelan, Yan Ryan, Ying Sims, Jason Skelton, Michelle Smith, , Suzanne T Williams

The paper reports the high-quality genome assembly of Pecten maximus, revealing gene duplicates and highlighting Nav1 as a candidate for toxin resistance.

GigaScience · Apr 30, 2020Peer-reviewedGenomics