Author

Haowei Xu

Purdue University West Lafayette

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Bioengineering· 1 Bioinformatics· 1 Microbiology· 1

Signature Assays, Organisms & Methods

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Research Focus:cell type annotation· 2 Research Focus:clustering· 2 Approach:deep learning· 2 Research Focus:differential expression· 2 Organism:human· 2 Assay:bulk RNA-seq· 1 Approach:contrastive learning· 1 Research Focus:drug response / drug discovery· 1

Frequent Co-Authors

Ahmed Abdelbsset-Ismail· 1 shared Alex P. CarlliD· 1 shared Bo Zhang· 1 shared Changping LiiD· 1 shared Charles C. DaiiD· 1 shared Eric Jiang· 1 shared Haihui Wu· 1 shared Haimi Zhao· 1 shared

Activity by Year

2025-2026 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 17 mutual co-author links

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1 shared paperBioinformatics

Ahmed Abdelbsset-Ismail

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3 papers

Recent·Most cited

Characterization of the Gut Microbiota and Serum Metabolomics in Patients with Type 2 Diabetes Mellitus and Newly Diagnosed Acute Coronary Syndrome

Hongliang Wu, Yihui Teng, Ruiyi Chen, Haimi Zhao, Wangang Guo, K. Wang, Haowei Xu, Jiaying Zhou, Yan Li, Yuerong Xu, Mingming Zhang

This study identifies key gut microbiota and serum metabolite biomarkers that distinguish T2DM patients with ACS from those without, achieving high diagnostic accuracy using a multi-omics approach.

bioRxiv · Feb 10, 2026 · PreprintMicrobiology

Glycogen Engineering Improves the Starvation Resistance of Mesenchymal stem cells and their Therapeutic Efficacy in Pulmonary Fibrosis

Yongyue Xu, Mamatali Rahman, Zhaoyan Wang, Bo Zhang, Hanqi Xie, Lei Wang, Haowei Xu, Xiaodan Sun, Shan Cheng, Qiong Wu

This study engineers glycogen metabolism in mesenchymal stem cells to improve their survival during starvation and therapeutic efficacy in pulmonary fibrosis.

eLife · Dec 9, 2025Peer-reviewedBioengineering

TOGGLE delineates fate and function within individual cell types via single cell transcriptomics

Junpeng Chen, Tianda Sun, Tian Song, Zhouweiyu Chen, Haowei Xu, Zixuan Guo, Eric Jiang, Yibing Nong, Tao Yuan, Charles C. Dai, Yexing Yan, Jinwen Ge, Haihui Wu, Tong Yang, Shanshan Wang, , Alex P. Carll

TOGGLE identifies functional heterogeneity within cell types using single-cell transcriptomics, revealing distinct states like ferroptosis and apoptosis in ischemic stroke and uncovering epigenetic memory in neural stem cells.

bioRxiv · Jan 1, 2025 · PreprintBioinformatics