Author

Hui Gao

ShanghaiTech University

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Same name, identified by ORCID

Biology Disciplines

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Bioinformatics· 1 Microbiology· 1

Signature Assays, Organisms & Methods

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Approach:deep learning· 2 Research Focus:benchmarking· 1 Research Focus:cell type annotation· 1 Organism:E. coli· 1 Organism:human· 1 Approach:large language model· 1 Research Focus:perturbation response prediction· 1 Assay:perturbation screen· 1

Frequent Co-Authors

An Yin· 1 shared C H I ZhangiD· 1 shared Erkai LiuiD· 1 shared Gufeng WangiD· 1 shared Jia SuniD· 1 shared Jian DaiiD· 1 shared Luyang ZhaoiD· 1 shared Na TangiD· 1 shared

Activity by Year

2025-2026 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 24 mutual co-author links

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1 shared paperBioinformatics

An Yin

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2 papers

Recent·Most cited

OCellus: A Language-Model Framework for Single-Cell, Spatial, and Perturbation Biology with Natural-Language Reasoning

C H I Zhang, Jia Sun, Zaoxu Xu, Renjie Liao, An Yin, Hui Gao, Erkai Liu, Yuanye Bao, Luyang Zhao, Gufeng Wang

OCellus is a language model that addresses limitations in single-cell, spatial, and perturbation biology by integrating natural-language reasoning across multiple tasks.

bioRxiv · Jul 12, 2026 · PreprintBioinformatics

AI-driven discovery of host thioredoxin as a CRISPR enhancer of phage-encoded miniature Cas12 hacker nuclease

Zhipeng Wang, Yujue Wang, Hui Gao, Jian Dai, Na Tang, Yannan Wang, Quanjiang Ji

This study identifies thioredoxin as a host factor that enhances the DNA cleavage efficiency of a phage-encoded Cas12 nuclease using AI-driven analysis and biochemical validation.

bioRxiv · Jan 20, 2025 · PreprintMicrobiology