Organotchi: an open-source tool for the automated segmentation, morphological characterization, and longitudinal tracking of organoids
Lizia Branco, Thomas Lautenschlager, Daria Andreeva, Zeynep Yentur, Francesco Castagnetti, Theresa Kagermeier, Isabel Potthof, Pierre Collignon, Kensington Potter Stephens, Julia Matilainen, Ralf Mikut, Simone Mayer
Organotchi automates segmentation and morphological analysis of neural organoids, quantifying features and tracking changes over time to improve quality assessment and downstream analysis.
bioRxiv · Nov 6, 2026 · PreprintBioinformatics