Author

J. C. Abbott

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Microbiology· 3 Biochemistry· 1 Cell Biology· 1

Signature Assays, Organisms & Methods

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Approach:experimental assay· 4 Organism:bacteria (other)· 3 Assay:whole-genome sequencing· 3 Research Focus:cell type annotation· 2 Research Focus:cell signaling & trafficking· 1 Research Focus:deconvolution· 1 Research Focus:development & morphogenesis· 1 Research Focus:differential expression· 1

Frequent Co-Authors

C. MacPhee· 2 shared M. Kalamara· 2 shared N. Stanley-Wall· 2 shared A. J. Brenes· 1 shared C. P. Baker· 1 shared D. Bulgarelli· 1 shared F. Concas· 1 shared I. S. Nathke· 1 shared

Activity by Year

2021-2023 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 10 mutual co-author links

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2 shared papersMicrobiology

C. MacPhee

Mutual co-authors in cluster

Author profile →

5 papers

Recent·Most cited

Optimising Spectronaut search parameters to improve data quality with minimal proteome coverage reductions in DIA analyses of heterogeneous samples

C. P. Baker, R. Bruderer, J. C. Abbott, S. Arthur, A. J. Brenes

The paper optimizes Spectronaut search parameters to reduce false positives in DIA proteomics with minimal loss of true positives in heterogeneous samples.

bioRxiv · Oct 11, 2023 · PreprintBiochemistry

The role of the epipeptide EpeX in defining competitive fitness in intra-species mixed isolate colony biofilms of Bacillus subtilis

M. Kalamara, J. C. Abbott, T. Sukhodub, C. MacPhee, N. Stanley-Wall

This study identifies EpeX, an epipeptide produced by Bacillus subtilis, as a competitive fitness determinant in intra-species biofilm interactions, showing isolate-specific effects.

bioRxiv · Feb 9, 2023 · PreprintMicrobiology

The adenomatous polyposis coli protein 3o years on

J. C. Abbott, I. S. Nathke

This study examines the conservation of APC across species and relationships between APC protein families using existing sequencing data.

bioRxiv · Nov 14, 2022 · PreprintCell Biology

Biofilm hydrophobicity in environmental isolates of Bacillus subtilis

M. Kalamara, J. C. Abbott, C. MacPhee, N. Stanley-Wall

This study examines biofilm hydrophobicity in diverse Bacillus subtilis isolates, finding that hydrophobicity is not universal and is not solely due to poly {gamma}-glutamic acid.

bioRxiv · Apr 29, 2021Microbiology

A genome-annotated bacterial collection of the barley rhizosphere microbiota

S. Robertson-Albertyn, F. Concas, L. H. Brown, J. N. Orr, J. C. Abbott, T. S. George, D. Bulgarelli

The paper presents a genome-annotated bacterial collection from barley rhizosphere microbiota, showing broad phylogenetic diversity in plant growth-promoting traits.

bioRxiv · Mar 10, 2021Microbiology