Author

Jacob Alonso

Broad Institute

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Genomics· 1

Signature Assays, Organisms & Methods

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Research Focus:differential expression· 1 Research Focus:genome assembly· 1 Assay:metagenomics· 1 Organism:rat· 1 Approach:statistical model· 1 Research Focus:variant calling· 1 Assay:whole-genome sequencing· 1

Frequent Co-Authors

Anne G. Stengle· 1 shared Christopher R. HustediD· 1 shared Daniel E. NeafseyiD· 1 shared Diane P. GenereuxiD· 1 shared Elinor K. KarlssoniD· 1 shared Eric J. Baitchman· 1 shared Lucas Roberto MoreiraiD· 1 shared Rachel A. JohnstoniD· 1 shared

Activity by Year

2026-2026 · peak 1/yr

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10 top collaborators · 45 mutual co-author links

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1 shared paperGenomics

Anne G. Stengle

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1 paper

Recent·Most cited

GenomicsJournal of HeredityPeer-reviewedOct 3, 2026

Population genetics, trait mapping and fungal pathogen surveillance using untargeted sequencing in timber rattlesnakes (Crotalus horridus)

Christopher R. Husted, Jacob Alonso, Ross Swofford…·Elinor K. Karlsson

This study uses untargeted sequencing to analyze population genetics and pathogen surveillance in timber rattlesnakes, finding genetic distinctness and a color variation locus linked to ALDH4A1.

DOI 10.1093/jhered/esag080

ratwhole-genome sequencing