Author

James Liu

Shanghai University

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Same name, identified by ORCID

Biology Disciplines

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Bioinformatics· 2 Genetic & Genomic Medicine· 1 Neuroscience· 1

Signature Assays, Organisms & Methods

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Research Focus:differential expression· 3 Organism:human· 3 Approach:statistical model· 3 Research Focus:benchmarking· 2 Assay:bulk RNA-seq· 2 Approach:experimental assay· 1 Organism:mouse· 1 Research Focus:software / tool· 1

Frequent Co-Authors

Hanming Gu· 2 shared Amelia NaikiD· 1 shared Andrea Hilary NemethiD· 1 shared Andrea Louise VincentiD· 1 shared Andrew R. WebsteriD· 1 shared Anthony T. MooreiD· 1 shared Beatriz Menéndez· 1 shared Bethany Y. NortoniD· 1 shared

Activity by Year

2022-2025 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 22 mutual co-author links

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2 shared papersBioinformatics

Hanming Gu

Author profile →

4 papers

Recent·Most cited

Development and validation of a stakeholder-driven, self-contained electronic informed consent platform for trio-based genomic research studies

Bethany Y. Norton, James Liu, Sara A. Lewis, Helen Magee, Tyler N. Kruer, Rachael Dinh, Somayeh Bakhtiari, Sandra H. Nordlie, Sheetal Shetty, Jennifer Heim, Yumi Nishiyama, Jorge I. Arango, Darcy Johnson, Lee Seabrooke, Mitchell D. Shub, , Michael C. Kruer

The paper develops and validates an electronic informed consent platform for trio-based genomic research, showing high participant comprehension and satisfaction.

AJOB Empirical Bioethics · Jun 23, 2025Peer-reviewedGenetic & Genomic Medicine

Neuropathy target esterase activity predicts retinopathy among PNPLA6 disorders

James Liu, Yi He, Cara Lwin, Marina Han, Bin Guan, Amelia Naik, Chelsea Bender, Nia Moore, Laryssa A. Huryn, Yuri V. Sergeev, Haohua Qian, Yong Zeng, Lijin Dong, Pinghu Liu, Jingqi Lei, , Robert B. Hufnagel

The paper identifies NTE activity as a biomarker for retinopathy and endocrinopathy in PNPLA6 disorders, using clinical and preclinical data to establish a genotype-activity-phenotype relationship.

bioRxiv · Jun 9, 2023 · PreprintNeuroscience

Genomic analyses identify key molecules and significant signaling pathways in AZIN1 regulated prostate cancer cells

Tingxiang Chang, Hanming Gu, James Liu

The paper identifies key molecules and signaling pathways in AZIN1-regulated prostate cancer using RNA-seq data from the GSE189379 dataset.

bioRxiv · Jan 29, 2022 · PreprintBioinformatics

Genomic analyses identify significant molecules and biological processes in colorectal cancer cells with DNA damage

Hongmei Guo, Mason Zhang, Hanming Gu, James Liu

This study identifies key molecules and pathways affected by DNA damage in colorectal cancer using RNA-seq data from the GSE189366 dataset.

bioRxiv · Jan 24, 2022 · PreprintBioinformatics