Author

Jonathon Brenner

Loyola University Chicago

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Bioinformatics· 1 Genomics· 1

Signature Assays, Organisms & Methods

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Research Focus:benchmarking· 2 Approach:statistical model· 2 Organism:bacteria (other)· 1 Assay:bulk RNA-seq· 1 Research Focus:database / resource· 1 Approach:experimental assay· 1 Research Focus:gene regulatory network inference· 1 Organism:human· 1

Frequent Co-Authors

Catherine PutontiiD· 1 shared Dan L Nicolae· 1 shared GTEx Consortium· 1 shared Hae Kyung Im· 1 shared Heather E Wheeler· 1 shared Kaanan P Shah· 1 shared Keston Aquino-Michaels· 1 shared Laurynas KalesinskasiD· 1 shared

Activity by Year

2016-2017 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 29 mutual co-author links

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1 shared paperBioinformatics

Catherine PutontiORCID

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Author profile →

2 papers

Recent·Most cited

Exploring the Diversity of Bacillus whole genome sequencing projects using Peasant, the Prokaryotic Assembly and Annotation Tool

Jonathon Brenner, Laurynas Kalesinskas, Catherine Putonti

The paper introduces Peasant, a tool for microbial genome assembly and annotation, and demonstrates its use on Bacillus whole genome sequencing data to analyze diversity.

bioRxiv · Apr 28, 2017 · PreprintBioinformatics

Survey of the Heritability and Sparsity of Gene Expression Traits Across Human Tissues

Heather E Wheeler, Kaanan P Shah, Jonathon Brenner, Tzintzuni Garcia, Keston Aquino-Michaels, GTEx Consortium, Nancy J Cox, Dan L Nicolae, Hae Kyung Im

The paper surveys heritability and sparsity of gene expression traits across human tissues, finding local heritability is sparse and current sample sizes limit distal heritability analysis.

bioRxiv · Sep 8, 2016Genomics