Author

K. Simek

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Ecology· 2 Microbiology· 2

Signature Assays, Organisms & Methods

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Assay:metagenomics· 4 Research Focus:ecology & biodiversity· 3 Approach:experimental assay· 3 Research Focus:cell type annotation· 2 Research Focus:clustering· 1 Assay:proteomics· 1 Research Focus:spatial domain detection· 1 Approach:statistical model· 1

Frequent Co-Authors

M. M. Salcher· 4 shared T. Shabarova· 3 shared A.-S. Andrei· 2 shared I. Mukherjee· 2 shared J. Seda· 2 shared P. Znachor· 2 shared R. Ghai· 2 shared S.-i. Nakano· 2 shared

Activity by Year

2018-2024 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 34 mutual co-author links

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4 shared papersEcology

M. M. Salcher

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Author profile →

4 papers

Recent·Most cited

Depth-dependent dynamics of protist communities as an integral part of spring succession in a freshwater reservoir

I. Mukherjee, V. Grujcic, M. M. Salcher, P. Znachor, J. Seda, M. Devetter, P. Rychtecky, K. Simek, T. Shabarova

The paper investigates depth-dependent protist community dynamics in a freshwater reservoir during spring, revealing distinct community structures at different depths.

bioRxiv · Feb 1, 2024 · PreprintEcology

Microbial drama in four acts - Extreme rain events cause cyclic succession in plankton communities

T. Shabarova, M. M. Salcher, P. Porcal, P. Znachor, J. Nedoma, H.-P. Grossart, J. Seda, J. Hejzlar, K. Simek

The paper shows that extreme rain events cause cyclic succession in microbial and plankton communities of a forest pond, with recovery occurring through four distinct phases.

Nature Microbiology · Jan 28, 2021Peer-reviewedEcology

A freshwater radiation of diplonemids

I. Mukherjee, M. M. Salcher, A.-S. Andrei, V. Kavagutti, T. Shabarova, V. Grujcic, M. Haber, P. Layoun, Y. Hodoki, S.-i. Nakano, K. Simek, R. Ghai

The paper detects freshwater diplonemids in multiple lakes, finds they form a new lineage, and suggests marine diplonemid diversity may be overestimated.

bioRxiv · May 14, 2020Microbiology

Hidden in plain sight - highly abundant and diverse planktonic freshwater Chloroflexi

M. Mehrshad, M. M. Salcher, Y. Okazaki, S.-i. Nakano, K. Simek, A.-S. Andrei, R. Ghai

The paper examines the diversity and distribution of freshwater Chloroflexi in various pelagic habitats, revealing their genomic diversity and ecological roles.

bioRxiv · Jul 10, 2018Microbiology