Author

Kasper Hansen

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

Click to filter author papers

Bioinformatics· 1 Genomics· 1

Signature Assays, Organisms & Methods

Click to filter · or open tag

Assay:DNA methylation· 2 Organism:human· 2 Approach:statistical model· 2 Research Focus:batch correction / integration· 1 Research Focus:chromatin & epigenetic regulation· 1 Research Focus:deconvolution· 1 Research Focus:differential expression· 1 Approach:experimental assay· 1

Frequent Co-Authors

Alain PacisiD· 1 shared Anne Danckaert· 1 shared Anne Dumaine· 1 shared Athma Pai· 1 shared Brigitte Gicquel· 1 shared Chuan HeiD· 1 shared Francesca LucaiD· 1 shared Jean-Christophe Grenier· 1 shared

Activity by Year

2015-2016 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 36 mutual co-author links

Click any collaborator node to inspect or filter shared papers

Focal author (center)Selected co-authorORCID co-authorUnlinked name

Curved chords = mutual co-authorship

1 shared paperGenomics

Alain PacisORCID

Mutual co-authors in cluster

Author profile →

2 papers

Recent·Most cited

Preprocessing, normalization and integration of the Illumina HumanMethylationEPIC array

Jean-Philippe Fortin, Timothy Triche, Kasper Hansen

The paper updates the minfi package to support the HumanMethylationEPIC array, introduces the ssNoob normalization method, and describes integration strategies for methylation data from multiple platforms.

bioRxiv · Jul 23, 2016Bioinformatics

Bacterial Infection Remodels the DNA Methylation Landscape of Human Dendritic Cells

Alain Pacis, Ludovic Tailleux, John Lambourne, Vania Yotova, Anne Dumaine, Anne Danckaert, Francesca Luca, Jean-Christophe Grenier, Kasper Hansen, Brigitte Gicquel, Miao Yu, Athma Pai, Jenny Tung, Chuan He, Tomi Pastinen, , Luis Barreiro

This study shows that bacterial infection rapidly alters DNA methylation in human dendritic cells, affecting enhancer elements and gene expression related to immune responses.

Genome Research · Sep 21, 2015Peer-reviewedGenomics