Author

Kavya Raghunathan

Broad Institute

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

Click to filter author papers

Genetics· 1 Genomics· 1 Neuroscience· 1

Signature Assays, Organisms & Methods

Click to filter · or open tag

Approach:experimental assay· 3 Organism:human· 3 Research Focus:benchmarking· 2 Assay:bulk RNA-seq· 2 Research Focus:drug response / drug discovery· 2 Research Focus:gene regulatory network inference· 2 Research Focus:cell type annotation· 1 Research Focus:differential expression· 1

Frequent Co-Authors

Curtis J. MelloiD· 3 shared Daniel MeyeriD· 3 shared James C. Nemesh· 3 shared Jana M. MitchelliD· 3 shared Kevin C. EgganiD· 3 shared Ralda NehmeiD· 3 shared Steven A. McCarrolliD· 3 shared Sulagna Dia GhoshiD· 3 shared

Activity by Year

2020-2023 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 45 mutual co-author links

Click any collaborator node to inspect or filter shared papers

Focal author (center)Selected co-authorORCID co-authorUnlinked name

Curved chords = mutual co-authorship

3 shared papersNeuroscience

Curtis J. MelloORCID

Mutual co-authors in cluster

Author profile →

3 papers

Recent·Most cited

Efficient generation of lower induced Motor Neurons by coupling Ngn2 expression with developmental cues

Francesco Limone, Irune Guerra San Juan, Jana M. Mitchell, Janell L.M. Smith, Kavya Raghunathan, Daniel Meyer, Sulagna Dia Ghosh, Alexander Couto, Joseph R. Klim, Brian J. Joseph, John T. Gold, Curtis J. Mello, James C. Nemesh, Brittany M. Smith, Matthijs Verhage, , Kevin C. Eggan

This study combines Ngn2 overexpression with small molecule patterning to efficiently generate lower induced Motor Neurons (liMoNes) from hPSCs, achieving high yields and functional characteristics.

Cell Reports · Jan 1, 2023Peer-reviewedNeuroscience

Natural variation in gene expression and Zika virus susceptibility revealed by villages of neural progenitor cells

Michael F. Wells, James C. Nemesh, Sulagna Dia Ghosh, Jana M. Mitchell, Curtis J. Mello, Daniel Meyer, Kavya Raghunathan, Matthew Tegtmeyer, Derek Hawes, Anna Neumann, Kathleen A. Worringer, Joseph J. Raymond, Sravya Kommineni, Karrie Chan, Daniel J. Ho, , Steven A. McCarroll

The paper identifies a common genetic variant in IFITM3 that explains most inter-individual variation in neural progenitor cell susceptibility to Zika virus using natural genetic variation and synthetic perturbations.

bioRxiv · Nov 8, 2021 · PreprintGenomics

Mapping genetic effects on cellular phenotypes with "cell villages"

Jana M. Mitchell, James C. Nemesh, Sulagna Dia Ghosh, Robert E. Handsaker, Curtis J. Mello, Daniel Meyer, Kavya Raghunathan, Heather de Rivera, Matthew Tegtmeyer, Derek Hawes, Anna Neumann, Ralda Nehme, Kevin C. Eggan, Steven A. McCarroll

Census-seq pools cells from >100 human donors into "cell villages" and quantifies donor DNA before and after selection to map genetic effects on cellular traits.

bioRxiv · Jun 29, 2020 · PreprintGenetics