M. Jamy

Identification of a new gregarine parasite in mass mortality events of freshwater pearl mussels (Margaritifera margaritifera) in Sweden

Benchmarking long-read sequencing strategies for obtaining ASV-resolved rRNA operons from environmental microeukaryotes

This study benchmarks long-read sequencing and ASV-resolving tools for accurate rRNA operon recovery from environmental microeukaryotes using a synthetic mock community.

metaPR2: a database of eukaryotic 18S rRNA metabarcodes with an emphasis on protists.

The paper introduces metaPR2, a database of processed 18S rRNA metabarcodes annotated with the PR2 reference database, to facilitate comparative studies of protist diversity across environments.

Global patterns and rates of habitat transitions across the eukaryotic tree of life

The paper investigates habitat transitions across eukaryotes, finding frequent salt barrier crossings in major lineages, with fungi showing high transition rates and suggesting non-saline habitats as ancestral.

Long metabarcoding of the eukaryotic rDNA operon to phylogenetically and taxonomically resolve environmental diversity

This study uses long-read sequencing to analyze eukaryotic rDNA operons, improving phylogenetic resolution and taxonomic classification of environmental DNA.

New phylogenomic analysis of the enigmatic phylum Telonemia further resolves the eukaryote tree of life

This study resolves the phylogenetic position of Telonemia as sister to the Sar supergroup using phylogenomic analysis of new transcriptome datasets.