Author

Mohini Bhade

University of California, San Francisco

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Neuroscience· 2 Genomics· 1

Signature Assays, Organisms & Methods

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Research Focus:cell type annotation· 3 Organism:human· 3 Approach:statistical model· 3 Research Focus:differential expression· 2 Approach:experimental assay· 2 Research Focus:gene regulatory network inference· 2 Assay:spatial transcriptomics· 2 Assay:bulk RNA-seq· 1

Frequent Co-Authors

Mercedes F. ParedesiD· 3 shared Arturo Álvarez-BuyllaiD· 2 shared Chongyuan LuoiD· 2 shared Eric Jinsheng HuangiD· 2 shared JaeYeon Kim· 2 shared Matthew G. Heffel· 2 shared Mohammad S. BaigiD· 2 shared Oier Pastor-AlonsoiD· 2 shared

Activity by Year

2021-2026 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 45 mutual co-author links

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3 shared papersNeuroscience

Mercedes F. ParedesORCID

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Author profile →

3 papers

Recent·Most cited

Spatial and Molecular Progression of Neural Progenitor Cells in the Developing Human Dentate Gyrus

Oier Pastor-Alonso, Matthew G. Heffel, Mohammad S. Baig, Jasmine Harris, Susana González-Granero, Siqian Li, Sol Beccari, Julia S. F. Chu, Hannah Lambing, I-Ling Lu, Matthew Varughese, Andrew L. Cheng, Jessica Le, Mohini Bhade, JaeYeon Kim, , Mercedes F. Paredes

This study maps the spatial and molecular changes in neural progenitor cells in the human dentate gyrus from gestation to postnatal stages, showing a decline in neurogenic potential and transition to astrocytic features.

bioRxiv · Jun 8, 2026 · PreprintNeuroscience

A Single-Cell and Spatial 3D Multi-omic Atlas of Developing Human Basal Ganglia and Inhibitory Neurons

Matthew G. Heffel, Heng Xu, Oier Pastor-Alonso, Xinzhe Li, Mohammad S. Baig, Rayyan Irfan Ghoor, Runjia Li, Colin Kern, Joonho Kum, Yi Zhang, Jon Paino, Min Jen Tsai, Chu-Yi Tai, Grant Tucker, Zoey Zhao, , Chongyuan Luo

This study creates a 3D multi-omic atlas of developing human basal ganglia and inhibitory neurons, revealing lineage-specific 3D genomic dynamics and regulatory programs associated with neuropsychiatric disease risk.

bioRxiv · Jan 29, 2026 · PreprintGenomics

Molecular diversity and lineage commitment of human interneuron progenitors

Dmitry Velmeshev, Manideep Chavali, Tomasz Jan Nowakowski, Mohini Bhade, Simone Mayer, Nitasha Goyal, Beatriz Alvarado, Walter Mancia, Shaohui Wang, Matthew L Speir, Maximilian Haeussler, David H. Rowitch, Arturo Álvarez-Buylla, Eric Jinsheng Huang, Mercedes F. Paredes, Arnold R. Kriegstein

The paper identifies molecular subtypes of human interneuron progenitors and immature interneurons using single-cell RNA sequencing and compares them to mouse data, revealing species-specific gene programs.

bioRxiv · May 13, 2021 · PreprintNeuroscience