Author

Ningning Zhao

Chinese Academy of Sciences

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Bioinformatics· 1

Signature Assays, Organisms & Methods

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Research Focus:benchmarking· 1 Research Focus:database / resource· 1 Approach:deep learning· 1 Research Focus:differential expression· 1 Assay:DNA methylation· 1 Research Focus:gene regulatory network inference· 1 Organism:human· 1 Approach:transformer / foundation model· 1

Frequent Co-Authors

Fan ZhangiD· 1 shared Fang Liu· 1 shared Hailong ZhaoiD· 1 shared Han Li· 1 shared Han ShuiD· 1 shared Haoyi WangiD· 1 shared Hongcang GuiD· 1 shared Jiamin SuniD· 1 shared

Activity by Year

2026-2026 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 45 mutual co-author links

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1 shared paperBioinformatics

Fan ZhangORCID

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1 paper

Recent·Most cited

Xenograft supervision and joint methylation-fragment-end encoding define a reusable molecular scoring layer for cell-free tumor DNA

Xuchao Zhang, Xiaojun Sun, Rui Wang, Ningning Zhao, Fang Liu, Xuhua Li, Jian Huang, Jiamin Sun, Han Li, Shang Lou, Haoyi Wang, Hailong Zhao, Han Shu, Peimeng Zhen, Hongcang Gu, , Fan Zhang

ctDNA-BERT scores individual bisulfite reads for cell-free DNA methylation analysis, achieving high accuracy in cancer staging without cohort-specific retraining.

bioRxiv · Oct 27, 2026 · PreprintBioinformatics