Author
Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.
6 papers
Recent·Most cited
M. Morel, F. Lemoine, A. Zhukova, O. Gascuel
The paper introduces ConDor, a method to detect convergent mutations in protein alignments by combining phylogenetic simulation and comparative analysis, showing improved accuracy on large datasets.
Genome Biology and Evolution · Mar 7, 2024Peer-reviewedEvolutionary Biology
F. Chevenet, G. Castel, E. Jousselin, O. Gascuel
PastView provides a user-friendly interface to compute and visualize ancestral character states and evolutionary scenarios from phylogenetic trees.
bioRxiv · May 27, 2019 · PreprintEvolutionary Biology
This paper demonstrates that accurately estimating both ancestral states and state change rates in phylogenetic trees is generally impossible from tip data, highlighting an inherent uncertainty in evolutionary reconstruction.
bioRxiv · Dec 26, 2018Evolutionary Biology
S. Ishikawa, A. Zhukova, W. Iwasaki, O. Gascuel
This paper introduces a fast likelihood method to reconstruct and visualize ancestral scenarios, showing its accuracy on simulated data and application to HIV-1C transmission routes.
bioRxiv · Jul 29, 2018Evolutionary Biology
M. Davila Felipe, J.-B. Domelevo Entfellner, F. Lemoine, J. Truszkowski, O. Gascuel
The paper analyzes the transfer distance and its normalization constant in phylogenetic trees, showing its asymptotic behavior and statistical significance.
bioRxiv · Jul 13, 2018Evolutionary Biology
F. Lemoine, J.-B. Domelevo Entfellner, E. Wilkinson, T. De Oliveira, O. Gascuel
The paper revises Felsensteins bootstrap method to improve support values for deep branches in large phylogenies without creating false supports.
bioRxiv · Jun 23, 2017Evolutionary Biology