Author

Osnat Penn

Allen Institute for Brain Science

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

Click to filter author papers

Neuroscience· 3

Signature Assays, Organisms & Methods

Click to filter · or open tag

Research Focus:cell type annotation· 3 Research Focus:clustering· 3 Organism:mouse· 3 Assay:scRNA-seq· 3 Approach:statistical model· 3 Research Focus:differential expression· 2 Research Focus:cell-cell communication· 1 Approach:deep learning· 1

Frequent Co-Authors

Aaron SzaferiD· 3 shared Bosiljka TasiciD· 3 shared Christine RimoriniD· 3 shared Christof Koch AiD· 3 shared Darren BertagnolliiD· 3 shared Ed S. LeiniD· 3 shared Eliza R. BarkaniD· 3 shared Hongkui ZengiD· 3 shared

Activity by Year

2018-2020 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 45 mutual co-author links

Click any collaborator node to inspect or filter shared papers

Focal author (center)Selected co-authorORCID co-authorUnlinked name

Curved chords = mutual co-authorship

3 shared papersNeuroscience

Aaron SzaferORCID

Mutual co-authors in cluster

Author profile →

3 papers

Recent·Most cited

Toward an integrated classification of neuronal cell types: morphoelectric and transcriptomic characterization of individual GABAergic cortical neurons

Nathan W. Gouwens, Staci A. Sorensen, Fahimeh Baftizadeh, Agata Budzillo, Brian Lee, Tim Jarsky, Lauren Alfiler, Katherine S. Baker, Eliza R. Barkan, Kyla Berry, Darren Bertagnolli, Kris Bickley, Jasmine Bomben, Thomas Braun, Krissy Brouner, , Hongkui Zeng

The paper characterizes transcriptomic and physiological properties of GABAergic cortical neurons in mice, identifying 20 interneuron met-types with consistent features across modalities.

Cell · Nov 1, 2020Peer-reviewedNeuroscience

Conserved cell types with divergent features between human and mouse cortex

Rebecca D. Hodge, Trygve E. Bakken, Jeremy A. Miller, Kimberly A. Smith, Eliza R. Barkan, Lucas T. Graybuck, Jennie Close, Brian Long, Nelson Johansen, Osnat Penn, Zizhen Yao, Jeroen Eggermont, Thomas Höllt, Boaz P. Levi, Soraya I. Shehata, , Ed S. Lein

The paper compares cell types in human and mouse cortex using single nucleus RNA-sequencing, finding conserved architecture with species-specific differences.

Nature · Aug 21, 2019Peer-reviewedNeuroscience

Shared and distinct transcriptomic cell types across neocortical areas

Bosiljka Tasic, Zizhen Yao, Lucas T. Graybuck, Kimberly A. Smith, Thuc Nghi Nguyen, Darren Bertagnolli, Jeff Goldy, Emma J. Garren, Michael N. Economo, Sarada Viswanathan, Osnat Penn, Trygve E. Bakken, Vilas Menon, Jeremy A. Miller, Olivia Fong, , Hongkui Zeng

The paper identifies shared and distinct transcriptomic cell types in two mouse neocortical regions using scRNA-seq, showing most excitatory types are region-specific while inhibitory types are shared.

Nature · Oct 25, 2018Peer-reviewedNeuroscience