Author

P. Frey

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Microbiology· 3 Evolutionary Biology· 2

Signature Assays, Organisms & Methods

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Approach:statistical model· 3 Assay:bulk RNA-seq· 2 Research Focus:cell type annotation· 2 Organism:fungi (other)· 2 Assay:whole-genome sequencing· 2 Research Focus:chromatin & epigenetic regulation· 1 Approach:comparative / phylogenetic analysis· 1 Research Focus:differential expression· 1

Frequent Co-Authors

S. Duplessis· 4 shared C. Louet· 3 shared F. Halkett· 2 shared I. V. Grigoriev· 2 shared J. Petrowski· 2 shared P. Guerillot· 2 shared A. Andrieux· 1 shared A. Hecker· 1 shared

Activity by Year

2017-2023 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 29 mutual co-author links

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4 shared papersMicrobiology

S. Duplessis

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Author profile →

5 papers

Recent·Most cited

A mechanistic-statistical approach to infer dispersal and demography from invasion dynamics, applied to a plant pathogen

M. Saubin, J. Coville, C. Xhaard, P. Frey, S. Soubeyrand, F. Halkett, F. Fabre

This paper develops a mechanistic-statistical framework to infer dispersal and demography from invasion dynamics, finding that poplar rust dispersal is best described by an Exponential-power kernel with frequent long-distance dispersal.

bioRxiv · Mar 21, 2023Evolutionary Biology

A remarkable expansion of oligopeptide transporter genes in rust fungi (Pucciniales) suggests a specialization in nutrients acquisition for obligate biotrophy

P. Guerillot, A. Salamov, C. Louet, E. Morin, P. Frey, I. V. Grigoriev, S. Duplessis

This study identifies an expansion of oligopeptide transporter genes in rust fungi, suggesting a specialized role in nutrient acquisition during biotrophic growth.

bioRxiv · Apr 20, 2022Microbiology

Expert annotation and life-cycle transcriptomics of transcription factors in rust fungi (Pucciniales) highlight the role of cold shock proteins in dormancy exit

C. Louet, C. Blot, E. Shelest, P. Guerillot, J. Petrowski, P. Frey, S. Duplessis

This study identifies transcription factors in rust fungi and finds that cold shock proteins are specifically expressed during dormancy exit in the rust life cycle.

bioRxiv · Oct 19, 2021 · PreprintMicrobiology

Genomic signatures of a major adaptive event in the pathogenic fungus Melampsora larici-populina

A. Persoons, A. Maupetit, C. Louet, A. Andrieux, A. Lipzen, K. W. Barry, H. Na, C. Adam, I. V. Grigoriev, V. Segura, S. Duplessis, P. Frey, F. Halkett, S. De Mita

The paper identifies a genomic signature of a recent adaptive event in the fungus Melampsora larici-populina, pinpointing a single amino acid change associated with overcoming host resistance.

bioRxiv · Apr 9, 2021Evolutionary Biology

The rust fungus Melampsora larici-populina expresses a conserved genetic program and distinct sets of secreted protein genes during infection of its two host plants, larch and poplar

C. Lorrain, C. Marchal, S. Hacquard, C. Delaruelle, J. Petrowski, B. Petre, A. Hecker, P. Frey, S. Duplessis

This study compares the transcriptomes of the rust fungus Melampsora larici-populina during infection of larch and poplar, identifying host-specific secreted protein genes involved in host colonization.

bioRxiv · Dec 6, 2017Microbiology