Author

P. Jurecka

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Biophysics· 2

Signature Assays, Organisms & Methods

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Approach:statistical model· 2 Research Focus:cell type annotation· 1 Research Focus:chromatin & epigenetic regulation· 1 Research Focus:clustering· 1 Assay:DNA methylation· 1 Research Focus:protein folding & dynamics· 1

Frequent Co-Authors

M. Zgarbova· 2 shared F. Cerny· 1 shared J. Salomon· 1 shared J. Sponer· 1 shared

Activity by Year

2021-2022 · peak 1/yr

Co-Author Collaboration Network

4 top collaborators · 4 mutual co-author links

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2 shared papersBiophysics

M. Zgarbova

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2 papers

Recent·Most cited

Continuous B- to A- Transition in Protein-DNA Binding - How Well Is It Described by Current AMBER Force Fields?

P. Jurecka, M. Zgarbova, F. Cerny, J. Salomon

This study evaluates how current AMBER force fields model the A/B DNA transition in protein-DNA complexes, finding underestimation of A-like intermediate states' stability.

bioRxiv · Jan 13, 2022 · PreprintBiophysics

Z-DNA as a Touchstone for Additive Empirical Force Fields and a Refinement of the Alpha/Gamma DNA torsions for AMBER

M. Zgarbova, J. Sponer, P. Jurecka

The paper improves AMBER force fields by refining gamma DNA torsions to better describe Z-DNA and non-canonical DNA structures.

bioRxiv · Jul 11, 2021Biophysics