Author

Patrick Hanel

Helmholtz Munich

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Bioinformatics· 2

Signature Assays, Organisms & Methods

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Assay:scATAC-seq· 2 Research Focus:cell type annotation· 1 Research Focus:differential expression· 1 Approach:experimental assay· 1 Research Focus:gene regulatory network inference· 1 Approach:graph neural network· 1 Organism:human· 1 Assay:scRNA-seq· 1

Frequent Co-Authors

Maria Colomé‐TatchéiD· 2 shared Aikaterini SymeonidiiD· 1 shared Akshaya RamakrishnaniD· 1 shared Anna DaneseiD· 1 shared Gabriele MalagoliiD· 1 shared Guy WolfiD· 1 shared Michaël SchubertiD· 1 shared

Activity by Year

2022-2026 · peak 1/yr

Co-Author Collaboration Network

7 top collaborators · 12 mutual co-author links

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2 shared papersBioinformatics

Maria Colomé‐TatchéORCID

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2 papers

Recent·Most cited

Geometry aware graph attention networks to explain single-cell chromatin state and gene expression

Gabriele Malagoli, Patrick Hanel, Anna Danese, Guy Wolf, Maria Colomé‐Tatché

SEAGALL uses geometry-aware graph attention networks to extract biologically relevant features from single-cell data, revealing cell identity drivers beyond marker genes.

Genome biology · Apr 23, 2026Peer-reviewedBioinformatics

epiAneufinder: identifying copy number variations from single-cell ATAC-seq data

Akshaya Ramakrishnan, Aikaterini Symeonidi, Patrick Hanel, Michaël Schubert, Maria Colomé‐Tatché

epiAneufinder identifies copy number variations from scATAC-seq data to explore single-cell CNV heterogeneity in cancer samples.

bioRxiv · Apr 3, 2022 · PreprintBioinformatics