Author

Patrick J. Fleming

Johns Hopkins UniversityPrimary ORCID profile (0009-0006-8586-2209 · 1 paper)Unclaimed ORCID profile · follow to get notified of new preprints

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Same name, identified by ORCID

Patrick J. FlemingiD1 paper · University of Maine

Biology Disciplines

Click to filter author papers

Bioinformatics· 1 Biophysics· 1

Signature Assays, Organisms & Methods

Click to filter · or open tag

Assay:protein structure· 2 Approach:statistical model· 2 Research Focus:drug response / drug discovery· 1 Research Focus:protein structure prediction· 1

Frequent Co-Authors

Carlos Henrique da SilveiraiD· 1 shared Herson H. M. Soares· 1 shared João Paulo Roquim RomanelliiD· 1 shared John J. Correia· 1 shared Karen G. FlemingiD· 1 shared

Activity by Year

2024-2025 · peak 1/yr

Co-Author Collaboration Network

5 top collaborators · 4 mutual co-author links

Click any collaborator node to inspect or filter shared papers

Focal author (center)Selected co-authorORCID co-authorUnlinked name

Curved chords = mutual co-authorship

1 shared paperBioinformatics

Carlos Henrique da SilveiraORCID

Mutual co-authors in cluster

Author profile →

2 papers

Recent·Most cited

FIBOS: R and Python packages for analyzing protein packing and structure

Herson H. M. Soares, João Paulo Roquim Romanelli, Patrick J. Fleming, Carlos Henrique da Silveira

The paper introduces FIBOS, an R and Python package for analyzing protein packing using the Occluded Surface algorithm with enhancements, showing AlphaFold models have greater packing variability than experimental structures.

Bioinformatics · Aug 4, 2025Peer-reviewedBioinformatics

The Molecular Basis for Hydrodynamic Properties of PEGylated Human Serum Albumin

Patrick J. Fleming, John J. Correia, Karen G. Fleming

The paper uses simulations and HullRad to predict hydrodynamic properties of PEGylated proteins, aiding in the design of modified therapeutics.

Biophysical Journal · May 21, 2024Peer-reviewedBiophysics