Author

Rich Bonneau

Simons Foundation

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

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Bioinformatics· 1

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Research Focus:differential expression· 1 Organism:human· 1 Assay:metagenomics· 1 Organism:mouse· 1 Approach:variational autoencoder· 1

Frequent Co-Authors

Gleb N. TikhonoviD· 1 shared Harri J LähdesmäkiiD· 1 shared James T. MortoniD· 1 shared Justin D. SilvermaniD· 1 shared

Activity by Year

2021-2021 · peak 1/yr

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4 top collaborators · 6 mutual co-author links

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1 shared paperBioinformatics

Gleb N. TikhonovORCID

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1 paper

Recent·Most cited

Scalable estimation of microbial co-occurrence networks with Variational Autoencoders

James T. Morton, Justin D. Silverman, Gleb N. Tikhonov, Harri J Lähdesmäki, Rich Bonneau

This paper introduces a scalable method using Variational Autoencoders to estimate microbial co-occurrence networks from high-dimensional microbiome data.

bioRxiv · Nov 9, 2021 · PreprintBioinformatics