Author

S. Carim

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Microbiology· 2

Signature Assays, Organisms & Methods

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Organism:bacteria (other)· 1 Approach:deep learning· 1 Organism:E. coli· 1 Approach:experimental assay· 1 Research Focus:host-pathogen & immune response· 1 Research Focus:variant effect prediction· 1 Assay:whole-genome sequencing· 1

Frequent Co-Authors

A. M. Deutschbauer· 2 shared A. P. Arkin· 2 shared M. N. Price· 2 shared V. K. Mutalik· 2 shared A. E. Kazakov· 1 shared A. L. Azadeh· 1 shared M. Callaghan· 1 shared P. J. Walian· 1 shared

Activity by Year

2018-2021 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 37 mutual co-author links

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2 shared papersMicrobiology

A. M. Deutschbauer

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2 papers

Recent·Most cited

Systematic Discovery of Pseudomonad Genetic Factors Involved in Sensitivity to Tailocins

S. Carim, A. L. Azadeh, A. E. Kazakov, M. N. Price, P. J. Walian, R. Chakraborty, A. M. Deutschbauer, V. K. Mutalik, A. P. Arkin

This study identifies genetic factors in pseudomonads that influence sensitivity to tailocins using transposon libraries and genomics.

The ISME Journal · Mar 1, 2021Peer-reviewedMicrobiology

Dub-seq: dual-barcoded shotgun expression library sequencing for high-throughput characterization of functional traits

V. K. Mutalik, P. S. Novichkov, M. N. Price, T. K. Owens, M. Callaghan, S. Carim, A. M. Deutschbauer, A. P. Arkin

Dub-seq enables high-throughput overexpression screens in E. coli by combining shotgun expression libraries with DNA barcode sequencing to identify genes with gain-of-function phenotypes.

bioRxiv · Aug 8, 2018Microbiology