Author

Sara Fernandez

New York Genome Center;Primary ORCID profile (0000-0003-2281-4526 · 1 paper)Unclaimed ORCID profile · follow to get notified of new preprints

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Same name, identified by ORCID

Sara FernandeziD1 paper · New York Genome Center

Biology Disciplines

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Genomics· 1 Neuroscience· 1

Signature Assays, Organisms & Methods

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Research Focus:benchmarking· 1 Assay:bulk RNA-seq· 1 Research Focus:cell type annotation· 1 Assay:ChIP-seq· 1 Research Focus:chromatin & epigenetic regulation· 1 Approach:deep learning· 1 Research Focus:development & morphogenesis· 1 Approach:experimental assay· 1

Frequent Co-Authors

Abigail J. Miller· 1 shared Allan Hunter YoungiD· 1 shared Álvaro Pastor· 1 shared Ameli Schwalber· 1 shared Anastasios-Polykarpos Athanasiadis· 1 shared André F. MarquandiD· 1 shared Andreas HeinziD· 1 shared Andreas J. ForstneriD· 1 shared

Activity by Year

2025-2026 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 45 mutual co-author links

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1 shared paperNeuroscience

Abigail J. Miller

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2 papers

Recent·Most cited

SPACE-Tag Enables High-Throughput Spatial Chromatin Profiling With CUT&Tag

Chao Yan, Ruiyang He, Sara Fernandez, Maros Pleska, Silas Maniatis, Ivan Raimondi, Sanja Vickovic

The paper introduces SPACE-Tag, a spatial CUT&Tag method for chromatin profiling, and applies it to the mouse brain to reveal age-related chromatin and transcriptome changes.

bioRxiv · Nov 7, 2026 · PreprintGenomics

Generating Synthetic Task-based Brain Fingerprints for Population Neuroscience Using Deep Learning

Emin Serin, Kerstin Ritter, Günter Schumann, Tobias Banaschewski, André F. Marquand, Henrik Walter, Andreas Heinz, Markus Ralser, Sven Olaf Twardziok, Nilakshi Vaidya, Antoine Bernas, Marcel Jentsch, Esther Hitchen, Elli Polemiti, Hedi Kebir, , George Ogoh

The paper introduces DeepTaskGen, a deep learning method that generates synthetic task-based contrast maps from resting-state fMRI data, outperforming benchmarks and enabling biomarker development for cognitive tasks.

Communications Biology · Nov 14, 2025Peer-reviewedNeuroscience