Author

Sena Oten

University of California, San Francisco

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Cancer Biology· 1 Developmental Biology· 1 Neuroscience· 1

Signature Assays, Organisms & Methods

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Research Focus:cell type annotation· 3 Organism:human· 3 Assay:bulk RNA-seq· 2 Approach:statistical model· 2 Research Focus:benchmarking· 1 Research Focus:clustering· 1 Research Focus:differential expression· 1 Assay:electronic health records· 1

Frequent Co-Authors

Edward F. ChangiD· 3 shared Alexander A. AabediiD· 2 shared David BrangiD· 2 shared Gray S. UmbachiD· 2 shared Jasleen KauriD· 2 shared Niels OlshauseniD· 2 shared Sanjeev J. HerriD· 2 shared Shawn L. Hervey‐JumperiD· 2 shared

Activity by Year

2025-2026 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 45 mutual co-author links

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3 shared papersDevelopmental Biology

Edward F. ChangORCID

Mutual co-authors in cluster

Author profile →

3 papers

Recent·Most cited

Scalable high-fidelity human vascularized cortical assembloids recapitulate neurovascular co-development and cell specialization

Shubhang Bhalla, Belda Gülsuyu, Damian Sanchez, Jayden M. Ross, Santhosh Arul, Adnan Gopinadhan, Muhammet M. Öztürk, Tanzila Mukhtar, Jonathan J. Augustin, J Wang, Joseph M. Kim, Chang N. Kim, Sena Oten, Yohei Rosen, John M. Bernabei, , Ethan A. Winkler

This paper introduces vascularized cortical assembloids (vCAs) that model neurovascular co-development and show improved cellular specialization and connectivity compared to standard cortical organoids.

bioRxiv · Jan 10, 2026 · PreprintDevelopmental Biology

Electrocorticographic Detection of Speech Networks in Glioma-infiltrated Cortex

Vardhaan Sai Ambati, Amit R L Persad, Jasleen Kaur, Sanjeev J. Herr, Emily Cunningham, Abraham Dada, Justyna O. Ekert, Quinn Greicius, Alexander Silva, Paul McMillan Villalobos, Niels Olshausen, Youssef Sibih, Sena Oten, Hunter S. Yamada, Gray S. Umbach, , Shawn L. Hervey‐Jumper

The paper identifies speech-related neural activity in IDH-mutant gliomas using electrocorticography, showing task-based and resting-state distinctions that could improve surgical outcomes.

bioRxiv · Jul 4, 2025 · PreprintNeuroscience

Aperiodic neural dynamics define a novel signature of glioma-induced excitation-inhibition dysregulation

Youssef Sibih, Abraham O Dada, Emily E Cunningham, Niels Olshausen, Jasleen Kaur, Jayabal Velmurugan, Sena Oten, Sanjeev J. Herr, Cesar Nava Gonzales, Andy G. S. Daniel, Saritha Krishna, Vardhaan Sai Ambati, Alexander A. Aabedi, Gray S. Umbach, Kanish Mirchia, , Shawn L. Hervey‐Jumper

The paper investigates how glioma infiltration affects the aperiodic slope of neural dynamics, finding it correlates with excitation dominance and semantic naming impairments.

bioRxiv · May 23, 2025 · PreprintCancer Biology