Author

Seoae Cho

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Genomics· 2 Microbiology· 1

Signature Assays, Organisms & Methods

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Approach:statistical model· 3 Research Focus:benchmarking· 2 Organism:human· 2 Organism:mouse· 2 Research Focus:variant calling· 2 Assay:whole-genome sequencing· 2 Organism:bacteria (other)· 1 Research Focus:clustering· 1

Frequent Co-Authors

Heebal KimiD· 3 shared Arang RhieiD· 2 shared Byung June KoiD· 2 shared Chul LeeiD· 2 shared Dong Ahn YooiD· 2 shared Erich David JarvisiD· 2 shared Giulio FormentiiD· 2 shared Jonathan M. D. WoodiD· 2 shared

Activity by Year

2022-2024 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 45 mutual co-author links

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3 shared papersGenomics

Heebal KimORCID

Mutual co-authors in cluster

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3 papers

Recent·Most cited

rRNA Operon Improves Species-Level Classification of Bacteria and Microbial Community Analysis Compared to 16S rRNA

Sohyoung Won, Seoae Cho, Heebal Kim

This study compares the accuracy of species-level classification and microbial community analysis using rRNA operon versus 16S rRNA gene and V3-V4 regions, finding the rRNA operon more accurate.

Microbiology Spectrum · Oct 4, 2024Peer-reviewedMicrobiology

Widespread false gene gains caused by duplication errors in genome assemblies

Byung June Ko, Chul Lee, Juwan Kim, Arang Rhie, Dong Ahn Yoo, Kerstin Howe, Jonathan M. D. Wood, Seoae Cho, Samara Brown, Giulio Formenti, Erich David Jarvis, Heebal Kim

The paper quantifies false duplications in genome assemblies of platypus, zebra finch, and Anna's hummingbird, showing they lead to overestimated gene family expansions.

Genome biology · Sep 27, 2022Peer-reviewedGenomics

False gene and chromosome losses affected by assembly and sequence errors

Juwan Kim, Chul Lee, Byung June Ko, Dong Ahn Yoo, Sohyoung Won, Adam M. Phillippy, Olivier D. Fedrigo, Guojie Zhang, Kerstin Howe, Jonathan M. D. Wood, Richard Michael Durbin, Giulio Formenti, Samara Brown, Lindsey J. Cantin, Claudio V. Mello, , Erich David Jarvis

The paper evaluates new vertebrate genome assemblies from the VGP against previous references, finding significant improvements in completeness and accuracy.

Genome biology · Sep 27, 2022Peer-reviewedGenomics