Author

Shengwei Ma

Yazhouwan National Laboratory, Sanya, China;Primary ORCID profile (0000-0001-6196-811X · 2 papers)Unclaimed ORCID profile · follow to get notified of new preprints

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Shengwei MaiD2 papers

Biology Disciplines

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Genomics· 2

Signature Assays, Organisms & Methods

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Research Focus:variant calling· 2 Assay:whole-genome sequencing· 2 Research Focus:benchmarking· 1 Approach:experimental assay· 1 Research Focus:gene regulatory network inference· 1 Research Focus:genome assembly· 1 Organism:plant (other)· 1 Approach:transformer / foundation model· 1

Frequent Co-Authors

Hang He· 2 shared Baoyue Zhang· 1 shared Bilian Qian· 1 shared Chao Liu· 1 shared Chao Qin· 1 shared Chengwei LiangiD· 1 shared Chengzhi Jiao· 1 shared Chunling Zhang· 1 shared

Activity by Year

2026-2026 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 27 mutual co-author links

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2 shared papersGenomics

Hang He

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2 papers

Recent·Most cited

WheatPanRef: a unified linear pan-reference genome for wheat genomics

Jianxia Niu, Peng Zhao, Wenjie Du, Xiaoyu Zhang, Hang He, Rudi Appels, Jiwen Zhao, Shengwei Ma, Tiantian Chen, Georg Haberer, Manuel Spannagl, Zhanhao Cao, Yuqi Zhang, Lingfeng Miao, Siqi Chen, , Qixin Sun

WheatPanRef provides a unified linear pan-reference genome for wheat, improving read alignment and enabling integration of genomic resources across diverse accessions.

bioRxiv · Nov 5, 2026 · PreprintGenomics

OneGenome-Rice (OGR): A genomic foundation model for rice

Bilian Qian, Chengwei Liang, Chao Qin, Chao Liu, Chunling Zhang, Chunyan Xu, Dongxu Li, Guirong Xue, Hang He, He Zhang, Huiying He, Duoyuan Chen, Jiwei Xu, Junyang Zhang, Jian Sun, , Ziqing Deng

OneGenome-Rice (OGR) is a genomic foundation model for rice pre-trained on 422 genomes, outperforming existing models in 11 tasks and enabling downstream applications like trait analysis and gene expression prediction.

bioRxiv · May 29, 2026 · PreprintGenomics