Author

T. M. Farrell

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Microbiology· 2

Signature Assays, Organisms & Methods

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Approach:statistical model· 2 Assay:whole-genome sequencing· 2 Research Focus:clustering· 1 Approach:deep learning· 1 Research Focus:differential expression· 1 Assay:DNA methylation· 1 Research Focus:gene regulatory network inference· 1 Research Focus:phylogenetics / evolution· 1

Frequent Co-Authors

A. G. Stengle· 1 shared A. M. Early· 1 shared B. L. MacInnis· 1 shared B. Lawson· 1 shared B. M. Glorioso· 1 shared C. L. Ettinger· 1 shared D. A. Grear· 1 shared D. E. Neafsey· 1 shared

Activity by Year

2019-2022 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 21 mutual co-author links

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1 shared paperMicrobiology

A. G. Stengle

Mutual co-authors in cluster

Author profile →

2 papers

Recent·Most cited

Population genetic analysis of Ophidiomyces ophidiicola, the causative agent of snake fungal disease, indicates recent introductions to the USA

J. T. Ladner, J. M. Palmer, C. L. Ettinger, J. E. Stajich, T. M. Farrell, B. M. Glorioso, B. Lawson, S. J. Price, A. G. Stengle, D. A. Grear, J. Lorch

This study analyzes the genomes of Ophidiomyces ophidiicola strains to determine the history of its introduction to the USA, finding recent introductions and expansions.

bioRxiv · Mar 23, 2022Microbiology

Detection of low-density Plasmodium falciparum infections using amplicon deep sequencing

A. M. Early, R. F. Daniels, T. M. Farrell, J. Grimsby, S. K. Volkman, D. F. Wirth, B. L. MacInnis, D. E. Neafsey

This paper evaluates four amplicon sequencing tools for detecting low-density Plasmodium falciparum infections, finding they can detect down to 5 genomes/l but have reduced accuracy at very low parasitemia.

bioRxiv · Feb 19, 2019Microbiology