Author

Xin Luo

Chinese Academy of Sciences

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Same name, identified by ORCID

Biology Disciplines

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Bioengineering· 1 Bioinformatics· 1 Genetics· 1

Signature Assays, Organisms & Methods

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Research Focus:gene regulatory network inference· 2 Research Focus:benchmarking· 1 Assay:bulk RNA-seq· 1 Research Focus:cell type annotation· 1 Research Focus:cell-cell communication· 1 Approach:contrastive learning· 1 Research Focus:differential expression· 1 Research Focus:dimensionality reduction· 1

Frequent Co-Authors

Aaron H. MorrisiD· 1 shared Amod TalekariD· 1 shared Antonio Louis A. Holmes· 1 shared Bae-Jin HaiD· 1 shared Bryan T. Wonski· 1 shared Costas Andreas LyssiotisiD· 1 shared Dominik AwadiD· 1 shared Elizabeth J. BealeriD· 1 shared

Activity by Year

2026-2026 · peak 3/yr

Co-Author Collaboration Network

10 top collaborators · 36 mutual co-author links

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1 shared paperBioengineering

Aaron H. MorrisORCID

Mutual co-authors in cluster

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3 papers

Recent·Most cited

A mycovirus identified from an outbreak fungal species complex reveals a parallel antiviral system

Zhenghao Shen, Zeyu Duan, Xiaoyu Ma, Linhao Song, Xin Luo, Jialong Xu, Ruiqiao Li, Yinglu Cui, Xiao Liu, Linqi Wang

The paper identifies a mycovirus in the Cryptococcus gattii species complex and reveals parallel antiviral mechanisms involving RNAi and a novel RNase III gene.

bioRxiv · Sep 17, 2026 · PreprintGenetics

H2O: A Foundation Model Bridging Histopathology to Spatial Multi-Omics Profiling

Yunjie Gu, Zihan Wu, Rui Yan, Zhikang Wang, Yuan Li, Senlin Lin, Yan Cui, Haoran Lai, Xin Luo, Shaohua Kevin Zhou, Zhiyuan Yuan, Jianhua Yao

H2O predicts spatial transcriptomics and proteomics from H&E images using a contrastive learning framework, outperforming existing models and recovering biologically relevant cell-cell communication.

bioRxiv · Apr 24, 2026 · PreprintBioinformatics

Synthetic Immunological Niche Reveals Early Immune Dysregulationand Stratifies Therapeutic Response in Type 1 Diabetes

Jyotirmoy Roy, Yifei Jiang, Runbo Mao, Jessica L. King, Amod Talekar, Lillian Page Holman, Haoxuan Zeng, Xin Luo, Peter Sajjakulnukit, Bae-Jin Ha, Kai Liu, Elizabeth J. Bealer, Laila M. Rad, Shahzad Sohail, Antonio Louis A. Holmes, , Lonnie D. Shea

The paper develops a synthetic immunological niche to identify early immune dysregulation and stratify therapeutic response in Type 1 Diabetes.

bioRxiv · Mar 10, 2026 · PreprintBioengineering