bioRxivEvolutionary Biology
More or less deadly? A mathematical model that predicts SARS-CoV-2 evolutionary direction.
Abstract
SARS-CoV-2 has caused tremendous deaths world wild. It is of great value to predict the evolutionary direction of SARS-CoV-2. In this paper, we proposed a novel mathematical model that could predict the evolutionary trend of SARS-CoV-2. We focus on the mutational effects on viral assembly capacity. A robust coarse-grained mathematical model is constructed to simulate the virus dynamics in the host body. Both virulence and transmissibility can be quantified in this model. The relationship between virulence and transmissibility can be simulated. A delicate equilibrium point that optimizing the transmissibility can be numerically obtained. Based on this model, we predict the virulence of SARS-CoV-2 might further decrease, accompanied by an enhancement of transmissibility. However, this trend is not continuous; its virulence will not disappear but remains at a relatively stable range. We can also explain the cross-species transmission phenomenon of certain RNA virus based on this model. A small-scale model which simulates the virus packing process is also proposed. It can be explained why a small number of mutations would lead to a significant divergence in clinical performance, both in the overall particle formation quantity and virulence. This research provides a mathematical attempt to elucidate the evolutionary driving force in RNA virus evolution.
Reproducibility ledger
Nobody has reported trying to reproduce this paper yet. Did you replicate an experiment or run the code? Your report saves the next lab a week.
Sign in to file a reproducibility report.
Related papers
- Phase transitions may explain why SARS-CoV-2 spreads so fast and why new variants are spreading faster
J. C. Phillips, M. Moret, … C. C. Chow·Physica A: Statistical Mechanics and its ApplicationsPeer-reviewed·Jul 1, 2022
- SIMPLICITY: an agent-based, multi-scale mathematical model to study SARS-CoV-2 intra- and between-host evolution.
Pietro Gerletti, Nils Gubela, … Max von Kleist·Communications BiologyPeer-reviewed·Jan 9, 2026
- The epidemiological signature of pathogen populations that vary in the relationship between free-living survival and virulence
L. M. Gomez, V. A. Meszaros, … C. B. Ogbunugafor·bioRxiv·Jun 8, 2020
- Within-host evolution of SARS-CoV-2: how often are mutations transmitted?
Chapin S. Korosec, Lindi M. Wahl, Jane Marie Heffernan·bioRxiv·Aug 8, 2023
- VirEvol platform:accurate prediction and visualization of SARS-CoV-2 evolutionary trajectory based on protein language model, structural information and immunological recognition mechanism
Xincheng Zeng, Linghao Zhang, … Buyong Ma·bioRxiv·Sep 15, 2023
- Transmission of mutated SARS-CoV-2 variants is favored by relatively prolonged infections due to delayed immunity
Katherine L. Owens, Pierce E. Radecki, … Daniel B. Reeves·bioRxiv·Sep 18, 2026