Author

A. Baidya

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Biophysics· 2

Signature Assays, Organisms & Methods

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Research Focus:protein folding & dynamics· 2 Assay:protein structure· 2 Approach:biophysical modeling· 1 Approach:deep learning· 1 Research Focus:protein structure prediction· 1 Approach:statistical model· 1 Research Focus:variant effect prediction· 1 Organism:virus· 1

Frequent Co-Authors

D. L. Cox· 2 shared R. L. Davis· 2 shared R. Mahboubi-Ardakani· 2 shared G. Gonzalez· 1 shared J. Arsuaga· 1 shared J. Lusk· 1 shared M. Vazquez· 1 shared M. Z. Jawaid· 1 shared

Activity by Year

2021-2022 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 39 mutual co-author links

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2 shared papersBiophysics

D. L. Cox

Mutual co-authors in cluster

Author profile →

2 papers

Recent·Most cited

Computational study of the furin cleavage domain of SARS-CoV-2: delta binds strongest of extant variants

M. Z. Jawaid, A. Baidya, S. Jakovcevic, J. Lusk, R. Mahboubi-Ardakani, N. Solomon, G. Gonzalez, J. Arsuaga, M. Vazquez, R. L. Davis, D. L. Cox

The paper uses AlphaFold to predict furin cleavage domain structures and finds delta variant has strong binding, with some rare sequences matching it statistically.

bioRxiv · Jan 4, 2022 · PreprintBiophysics

Simulation of the omicron variant of SARS-CoV-2 shows broad antibody escape, weakened ACE2 binding, and modest increase in furin binding

M.- Z. Jawaid, A. Baidya, R. Mahboubi-Ardakani, R. L. Davis, D. L. Cox

The paper simulates the omicron variant's spike protein interactions with ACE2, antibodies, and furin to assess binding changes and potential disease impact.

bioRxiv · Dec 14, 2021 · PreprintBiophysics