Author

A. Coudray

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Cancer Biology· 2 Evolutionary Biology· 1

Signature Assays, Organisms & Methods

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Organism:human· 3 Assay:bulk RNA-seq· 2 Approach:experimental assay· 2 Approach:statistical model· 2 Research Focus:cancer & tumor microenvironment· 1 Research Focus:cell type annotation· 1 Research Focus:chromatin & epigenetic regulation· 1 Assay:CRISPR screen· 1

Frequent Co-Authors

D. Trono· 2 shared P. Turelli· 2 shared A. M. Battenhouse· 1 shared A. Soper· 1 shared B. Deplancke· 1 shared C. Playfoot· 1 shared C. Raclot· 1 shared C. Thorball· 1 shared

Activity by Year

2018-2020 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 30 mutual co-author links

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2 shared papersCancer Biology

D. Trono

Mutual co-authors in cluster

Author profile →

3 papers

Recent·Most cited

Endogenous retroviruses drive KRAB zinc-finger family protein expression for tumor suppression

J. Ito, I. Kimura, A. Soper, A. Coudray, Y. Koyanagi, H. Nakaoka, I. Inoue, P. Turelli, D. Trono, K. Sato

The paper shows HERV activation in tumors upregulates KZFPs, which suppress cancer progression by downregulating cell cycle and adhesion genes, improving disease outcomes.

bioRxiv · Feb 2, 2020Cancer Biology

Primate-restricted KRAB zinc finger proteins and target retrotransposons control gene expression in human neurons

D. Trono, P. Turelli, C. Playfoot, D. Grun, C. Raclot, J. Pontis, A. Coudray, C. Thorball, J. Duc, E. V. Pankevich, B. Deplancke, V. Busskamp

The paper identifies primate-specific KZFPs that repress retrotransposons in human neurons, influencing differentiation and preventing neurotoxic responses.

bioRxiv · Nov 29, 2019Evolutionary Biology

Detection and benchmarking of somatic mutations in cancer genomes using RNA-seq data

A. Coudray, A. M. Battenhouse, P. Bucher, V. R. Iyer

This study develops and evaluates an RNA-seq pipeline for detecting somatic mutations in glioblastoma, showing improved performance compared to whole-exome sequencing.

bioRxiv · Jun 21, 2018Cancer Biology