Author

Arpan Ghosh

Department of Statistics, Texas A&M University, College Station, TX, USA;

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

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Genetics· 1

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Approach:contrastive learning· 1 Approach:deep learning· 1 Research Focus:differential expression· 1 Research Focus:gene regulatory network inference· 1 Organism:human· 1 Assay:scRNA-seq· 1 Research Focus:variant effect prediction· 1

Frequent Co-Authors

Ann Le· 1 shared Berk TurhaniD· 1 shared Danwei HuangfuiD· 1 shared Dhruba Nandi· 1 shared Dingyu LiuiD· 1 shared Hanbyul Lee· 1 shared Jesse M. Engreitz· 1 shared Kushal K. DeyiD· 1 shared

Activity by Year

2026-2026 · peak 1/yr

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10 top collaborators · 45 mutual co-author links

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1 shared paperGenetics

Ann Le

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1 paper

Recent·Most cited

Perturbation-induced gene programs map the hidden regulatory architecture of complex diseases

Berk Turhan, Hanbyul Lee, Dingyu Liu, Ann Le, Arpan Ghosh, Dhruba Nandi, Rahul Mazumder, Jesse M. Engreitz, Xin Jin, Danwei Huangfu, Kushal K. Dey

This paper introduces Perturbscape, a framework that uses perturbation-induced gene programs to identify disease-relevant genes and pathways, showing higher heritability informativeness than steady-state approaches.

bioRxiv · Nov 4, 2026 · PreprintGenetics