Author

Austin Smith

Wellcome/MRC Cambridge Stem Cell Institute

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

Click to filter author papers

Bioinformatics· 1 Systems Biology· 1

Signature Assays, Organisms & Methods

Click to filter · or open tag

Approach:statistical model· 2 Approach:benchmark study· 1 Research Focus:benchmarking· 1 Assay:bulk RNA-seq· 1 Research Focus:cell type annotation· 1 Research Focus:clustering· 1 Research Focus:deconvolution· 1 Research Focus:differential expression· 1

Frequent Co-Authors

A. Francis Stewart· 1 shared Abigail SheaiD· 1 shared Alejandra BrunaiD· 1 shared Ali Dariush· 1 shared Alina BollhageniD· 1 shared Alireza MolaeinezhadiD· 1 shared Andreas BeyeriD· 1 shared Andreas LackneriD· 1 shared

Activity by Year

2020-2026 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 24 mutual co-author links

Click any collaborator node to inspect or filter shared papers

Focal author (center)Selected co-authorORCID co-authorUnlinked name

Curved chords = mutual co-authorship

1 shared paperSystems Biology

A. Francis Stewart

Mutual co-authors in cluster

Author profile →

2 papers

Recent·Most cited

Serval: A modular framework for decoding imaging based spatial transcriptomics data

Jenkin Tsui, Naila Adam, Woongcheol Choi, Luna Y Liu, C. Cárcamo Flores, Shadi Ansari, Esther Kong, Yukta Thapliyal, Hakwoo Lee, Shahid Haider, Issac Von Riedemann, Ciara H. O’Flanagan, Mohammad Al Sa’d, Bruno Albuquerque, Hamid Raza Ali, , Nicholas A. Walton

Serval is a modular framework for decoding spatial transcriptomics data that introduces Cosine, a method improving transcript recovery and correlation with expression references.

Bioinformatics · Sep 27, 2026Peer-reviewedBioinformatics

Cooperative molecular networks drive a mammalian cell state transition

Andreas Lackner, Robert Sehlke, Marius Garmhausen, Giuliano Giuseppe Stirparo, Michelle Huth, Fabian Titz-Teixeira, Petra van der Lelij, Julia Ramesmayer, Henry Fabian Thomas, Meryem Ralser, Laura Santini, Mihail Sarov, A. Francis Stewart, Austin Smith, Andreas Beyer, Martin Leeb

The paper identifies molecular networks driving the transition from naive to formative pluripotency in mammalian cells using genetic and transcriptomic analyses.

bioRxiv · Mar 23, 2020 · PreprintSystems Biology