Author

B. Barz

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Biophysics· 3

Signature Assays, Organisms & Methods

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Research Focus:protein folding & dynamics· 2 Organism:human· 1 Approach:mechanistic / dynamical model· 1 Approach:simulation· 1 Approach:statistical model· 1 Assay:structural biology· 1

Frequent Co-Authors

B. Strodel· 2 shared A. K. Buell· 1 shared A. Paul· 1 shared A.-M. Illig· 1 shared J. Loschwitz· 1 shared M. Carballo-Pacheco· 1 shared S. Nath· 1 shared S. Samantray· 1 shared

Activity by Year

2019-2020 · peak 2/yr

Co-Author Collaboration Network

9 top collaborators · 17 mutual co-author links

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2 shared papersBiophysics

B. Strodel

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3 papers

Recent·Most cited

Monomeric amyloid beta-peptide (1-42) significantly populates compact fibril-like conformations

B. Barz, A. K. Buell, S. Nath

This study uses molecular dynamics simulations to show that the Aβ42 monomer adopts a fibril-like conformation in solution, suggesting a potential role in amyloid aggregation.

bioRxiv · Jun 23, 2020Biophysics

Molecular dynamics simulations of protein aggregation: protocols for simulation setup and analysis with Markov state models and transition networks

S. Samantray, W. Schumann, A.-M. Illig, M. Carballo-Pacheco, A. Paul, B. Barz, B. Strodel

The paper provides protocols for setting up and analyzing molecular dynamics simulations of peptide aggregation using GROMACS, including tools for determining oligomer size and deriving Markov state models and transition networks.

bioRxiv · Apr 25, 2020 · PreprintBiophysics

Large-scale, dynamin-like motions of the human guanylate binding protein 1 revealed by multi-resolution simulations

B. Barz, J. Loschwitz, B. Strodel

This study uses multi-resolution simulations to reveal large-scale motions in hGBP1, providing insights into its dynamics and dimerization mechanism.

bioRxiv · Jun 19, 2019Biophysics