Author

B. Nebie

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Evolutionary Biology· 1 Plant Biology· 1

Signature Assays, Organisms & Methods

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Research Focus:gene regulatory network inference· 2 Assay:whole-genome sequencing· 2 Approach:deep learning· 1 Research Focus:differential expression· 1 Approach:genetic perturbation / CRISPR· 1 Research Focus:host-pathogen & immune response· 1 Organism:plant (other)· 1 Approach:statistical model· 1

Frequent Co-Authors

A. Budden· 1 shared A. Rathore· 1 shared C. M. Lorts· 1 shared C. W. dePamphilis· 1 shared D. A. Odeny· 1 shared E. A. Kelly· 1 shared E. Habyarimana· 1 shared E. Manyasa· 1 shared

Activity by Year

2019-2022 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 21 mutual co-author links

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1 shared paperEvolutionary Biology

A. Budden

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Author profile →

2 papers

Recent·Most cited

DeepVariant calling provides insights into race diversity and its implication for sorghum breeding

P. Ruperao, P. Gandham, D. A. Odeny, S. Selvanayagam, N. Thirunavukkarasu, R. R. Das, M. Srikanda, H. Gandhi, E. Habyarimana, E. Manyasa, B. Nebie, S. P. Deshpande, A. Rathore

The paper uses deep learning to analyze sorghum genetic diversity, identifying 1.7 million SNPs and 2,370 genes under selection linked to domestication traits.

bioRxiv · Sep 6, 2022 · PreprintPlant Biology

Genomics of sorghum local adaptation to a parasitic plant

E. S. Bellis, E. A. Kelly, C. M. Lorts, H. Gao, V. L. Deleo, G. Rouhan, A. Budden, G. B. Bhaskara, Z. Hu, R. Muscarella, M. P. Timko, B. Nebie, S. M. Runo, N. D. Chilcoat, T. E. Juenger, , J. Lasky

This study identifies genetic variants in sorghum associated with resistance to the parasitic weed Striga hermonthica, revealing balancing selection and tradeoffs in resistance mechanisms.

bioRxiv · Dec 5, 2019Evolutionary Biology