Quantification of collagen and associated features from H&E-stained whole slide pathology images across cancer types using a physics-based deep learning model
Tan Huu Nguyen, Jun Zhang, Jennifer Hipp, Guillaume Chhor, Michael Griffin, Nhat Le, Deeksha Kartik, Yibo Zhang, Mohammad Mirzadeh, Julia Varao, Jim Allay, Morgan Sweeney, V H Ruelas Rivera, Brea Johnson, Jacqueline A. Brosnan‐Cashman, , Robert Egger
This paper introduces a deep learning model to predict collagen from H&E-stained images, enabling collagen quantification across cancer types and linking it to clinical outcomes.
bioRxiv · Mar 17, 2025 · PreprintPathology