Author

C. Andre

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Evolutionary Biology· 2 Cancer Biology· 1 Cell Biology· 1 Ecology· 1 Microbiology· 1

Signature Assays, Organisms & Methods

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Approach:statistical model· 5 Research Focus:clustering· 3 Assay:DNA methylation· 3 Assay:whole-genome sequencing· 3 Research Focus:differential expression· 2 Research Focus:gene regulatory network inference· 2 Assay:bulk RNA-seq· 1 Research Focus:cell type annotation· 1

Frequent Co-Authors

A. Houel· 1 shared A. M. Raninger· 1 shared A. Obermayer· 1 shared A. Primot· 1 shared A. Prouteau· 1 shared A. Spittler· 1 shared A. Zami· 1 shared B. Hedan· 1 shared

Activity by Year

2019-2023 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 16 mutual co-author links

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1 shared paperCancer Biology

A. Houel

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Author profile →

6 papers

Recent·Most cited

Analysis of in-patient evolution of Escherichia coli reveals potential links to relapse of bone and joint infections

S. Thiriet Rupert, J. Josse, D. Perez Pascual, J. Tasse, C. Andre, L. Abad, D. Lebeaux, J.-M. Ghigo, F. Laurent, C. Beloin

The paper analyzes in-patient evolution of Escherichia coli in bone and joint infections and identifies genetic and phenotypic changes associated with relapse.

bioRxiv · May 10, 2023 · PreprintMicrobiology

Serial depletion of Baltic herring since the Viking Age revealed by ancient DNA and population genomics

L. M. Atmore, L. Martinez-Garcia, D. Makowiecki, C. Andre, L. Lougas, J. H. Barrett, B. Star

This study uses ancient DNA and population genomics to reveal long-term depletion of Baltic herring from the Viking Age to the present, linking it to fishing pressure and climate changes.

bioRxiv · May 18, 2022 · PreprintEcology

Global, regional, and cryptic population structure in a high gene-flow transatlantic fish

E. Jansson, E. Faust, D. Bekkevold, M. Quintela, C. Durif, K. T. Halvorsen, G. Dahle, C. S. Pampoulie, J. Kennedy, B. Whittaker, L. Unneland, C. Andre, K. A. Glover

This study reveals extensive population genetic structuring in lumpfish despite high dispersal potential, identifying major splits and local substructures across the North Atlantic.

bioRxiv · Mar 22, 2022 · PreprintEvolutionary Biology

A functional corona around extracellular vesicles enhancesangiogenesis during skin regeneration and signals in immune cells

m. Wolf, R. Poupardin, E.-P. Patricia, C. Andre, C. Bloechl, A. Obermayer, G. G. Fausto, B. Vari, E. Eminger, H. M. Binder, A. M. Raninger, H. Sarah, G. Brachtl, A. Spittler, T. Heuser, , D. Strunk

This study shows that a functional protein corona on extracellular vesicles enhances angiogenesis and immune signaling, with corona removal inhibiting these effects.

bioRxiv · Sep 20, 2021 · PreprintCell Biology

Canine oral melanoma genomic and transcriptomic study defines two molecular subgroups with different therapeutical targets

A. Prouteau, S. Mottier, A. Primot, E. Cadieu, L. Bachelot, N. Botherel, F. Cabilic, A. Houel, L. Cornevin, C. Kergal, S. Corre, J. Abadie, C. Hitte, D. Gilot, K. Lindblad-Toh, , B. Hedan

This study identifies two molecular subgroups of canine oral melanoma with distinct therapeutic targets, suggesting potential for tailored treatments in humans.

bioRxiv · Aug 4, 2021Cancer Biology

Strong spatial genetic structure in a Baltic Sea herbivore due to recent range expansion, multiple bottlenecks and low connectivity

P. De Wit, P. R. Jonsson, R. T. Pereyra, M. Panova, C. Andre, K. Johannesson

The paper examines population genetic structure in the Baltic Sea crustacean Idotea balthica, finding strong spatial genetic patterns linked to biophysical connectivity and historical bottlenecks during range expansion.

bioRxiv · Apr 1, 2019Evolutionary Biology